RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-201ENST00000276201 SCGB3A2Q96PL1 93 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 CUTCQ9NTM9 273 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 TAS2R4Q9NYW5 299 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 EDARQ9UNE0 448 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 TMED7Q9Y3B3 224 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 KPTNQ9Y664 436 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 R4GMQ9 66 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 IGLV1-36A0A0B4J1U3 117 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 NKX2-8O15522 239 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 EIF1BO60739 113 aaKnown RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 MT-ATP6P00846 226 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 MT-ND4LP03901 98 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 FCGR3AP08637 254 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 PET100P0DJ07 73 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 MUC1P15941 1255 aaPredicted RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 MAS1LP35410 378 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 SERPINF1P36955 418 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 EIF1P41567 113 aaKnown RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 RPS18P62269 152 aaKnown RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 SKP1P63208 163 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 IL15RAQ13261 267 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 SCGB2B2Q4G0G5 96 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM128Q5BJH2 165 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 ATP1A1-AS1Q5TC04 95 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 UNQ6126/PRO20091Q6UXV3 157 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 TTLL10Q6ZVT0 673 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM200AQ86VY9 491 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 KDM8Q8N371 416 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 ARRDC1Q8N5I2 433 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 CSNK1A1LQ8N752 337 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 ZSCAN4Q8NAM6 433 aaPredicted RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 OR5T3Q8NGG3 340 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 LMF1Q96S06 567 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 ADAT1Q9BUB4 502 aaKnown RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 SELENOIQ9C0D9 397 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 LAT2Q9GZY6 243 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 SYT4Q9H2B2 425 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.95
UPF3B-201ENST00000276201 RALYQ9UKM9 306 aaKnown RBP9.15□□□□□ -0.95
UPF3B-201ENST00000276201 LOC400499M0QZD8 3231 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 A0A1B0GX78 115 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 WIPF3A6NGB9 483 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 SFT2D2O95562 160 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 PNPP00491 289 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 GAPDHP04406 335 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ERCC1P07992 297 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 NAT2P11245 290 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ABCD3P28288 659 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 UCP2P55851 309 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ATXN7L3Q14CW9 347 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 PCK2Q16822 640 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 LRRC37A5PQ49AS3 106 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 NKAIN1Q4KMZ8 207 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 FAM69BQ5VUD6 431 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 TRAPPC6BQ86SZ2 158 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 OR4C3Q8NH37 302 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 SLC25A44Q96H78 314 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 GPR87Q9BY21 358 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 SLC5A7Q9GZV3 580 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 UBQLN4Q9NRR5 601 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 PRODH2Q9UF12 536 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 SLC22A13Q9Y226 551 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 PRSS37A4D1T9 235 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM235A6NFC5 223 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ZNF705EA8MWA4 302 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 H0YIZ8 118 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 FBXO45P0C2W1 286 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 TOMM34Q15785 309 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 MOGAT2Q3SYC2 334 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 MDGA2Q7Z553 956 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 PEG10Q86TG7 708 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 METTL27Q8N6F8 245 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ZNF615Q8N8J6 731 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 TMED6Q8WW62 240 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 HIST1H2BAQ96A08 127 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 MRPL22Q9NWU5 206 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 GTF2A1LQ9UNN4 478 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 GPR132Q9UNW8 380 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 FARSAQ9Y285 508 aaKnown RBP9.14□□□□□ -0.95
UPF3B-201ENST00000276201 DTX4Q9Y2E6 619 aa9.14□□□□□ -0.95
UPF3B-201ENST00000276201 TRAV36DV7A0A075B6V5 113 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 C9J4A7 227 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 ZNF264O43296 627 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 SGCEO43556 437 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 IL33O95760 270 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 IGHV2-5P01817 119 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 CHRM2P08172 466 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 GSTP1P09211 210 aaKnown RBP9.13□□□□□ -0.95
UPF3B-201ENST00000276201 RNH1P13489 461 aaKnown RBP9.13□□□□□ -0.95
UPF3B-201ENST00000276201 DNASE1L1P49184 302 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 AKR1C2P52895 323 aa9.13□□□□□ -0.95
UPF3B-201ENST00000276201 RPL27P61353 136 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms