RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ERGP11308 486 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 MMP15P51511 669 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 GAB4Q2WGN9 574 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 ESCO2Q56NI9 601 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 TMPRSS7Q7RTY8 843 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 KANSL1Q7Z3B3 1105 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
TIMP3-201ENST00000266085 C1orf87Q8N0U7 546 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 SVBPQ8N300 66 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 MCHR2Q969V1 340 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 RIMS4Q9H426 269 aaPredicted RBP13.78□□□□□ -0.2
TIMP3-201ENST00000266085 SERPINE3A8MV23 424 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 HPP00738 406 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 AADACP22760 399 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 SSBP1Q04837 148 aaKnown RBP13.78□□□□□ -0.2
TIMP3-201ENST00000266085 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 M1APQ8TC57 530 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 FLVCR2Q9UPI3 526 aa13.78□□□□□ -0.2
TIMP3-201ENST00000266085 FCGR2CP31995 323 aa13.77□□□□□ -0.2
TIMP3-201ENST00000266085 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.2
TIMP3-201ENST00000266085 APH1BQ8WW43 257 aa13.77□□□□□ -0.2
TIMP3-201ENST00000266085 SLC39A9Q9NUM3 307 aa13.77□□□□□ -0.2
TIMP3-201ENST00000266085 EDARQ9UNE0 448 aa13.77□□□□□ -0.2
TIMP3-201ENST00000266085 DTX4Q9Y2E6 619 aa13.77□□□□□ -0.2
TIMP3-201ENST00000266085 DFFBO76075 338 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 LALBAP00709 142 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 SNRNP70P08621 437 aaKnown RBP13.77□□□□□ -0.21
TIMP3-201ENST00000266085 ARL3P36405 182 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 LTBRP36941 435 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 SERPINF1P36955 418 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 CLDN20P56880 219 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
TIMP3-201ENST00000266085 OR13C8Q8NGS7 320 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 MARCH1Q8TCQ1 289 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 FRZBQ92765 325 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 TECTBQ96PL2 329 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 BAXQ07812 192 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 CST9LP1Q5W188 147 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 CRIPAKQ8N1N5 446 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 ZNF808Q8N4W9 903 aaPredicted RBP13.77□□□□□ -0.21
TIMP3-201ENST00000266085 OR4C16Q8NGL9 310 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 HAS2Q92819 552 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 SSX3Q99909 188 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 PLEKHB1Q9UF11 243 aaPredicted RBP13.77□□□□□ -0.21
TIMP3-201ENST00000266085 ZNF391Q9UJN7 358 aa13.77□□□□□ -0.21
TIMP3-201ENST00000266085 C1QCP02747 245 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 LSM11P83369 360 aaKnown RBP eCLIP13.76□□□□□ -0.21
TIMP3-201ENST00000266085 MAMSTRQ6ZN01 415 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 H2BFWTQ7Z2G1 175 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 OR2AE1Q8NHA4 323 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 GSX2Q9BZM3 304 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 MYO16Q9Y6X6 1858 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 A0A1B0GUH1 482 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 C21orf140B9A014 251 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 KRBOX1C9JBD0 128 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 DUSP1P28562 367 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 RAC3P60763 192 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 UBE2MP61081 183 aaKnown RBP13.76□□□□□ -0.21
TIMP3-201ENST00000266085 C17orf47Q8NEP4 570 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 ZNF71Q9NQZ8 489 aaPredicted RBP13.76□□□□□ -0.21
TIMP3-201ENST00000266085 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 ZNF32P17041 273 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 INSL4Q14641 139 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 ISXQ2M1V0 245 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 CMTM3Q96MX0 182 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 SERTAD4Q9NUC0 356 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 A0A0A6YYJ9 748 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 APOA2P02652 100 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 OR4E1P0C645 316 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 KIR2DL3P43628 341 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 CDONQ4KMG0 1287 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 RBMS3Q6XE24 437 aaKnown RBP13.76□□□□□ -0.21
TIMP3-201ENST00000266085 FBXL14Q8N1E6 418 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 TM4SF19Q96DZ7 209 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 PILRAQ9UKJ1 303 aa13.76□□□□□ -0.21
TIMP3-201ENST00000266085 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 CCL3P10147 92 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 USF2Q15853 346 aaPredicted RBP13.75□□□□□ -0.21
TIMP3-201ENST00000266085 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 PRAMEF6Q5VXH4 476 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 C9orf40Q8IXQ3 194 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 SLC35G3Q8N808 338 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 BIN3Q9NQY0 253 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 OR5H15A6NDH6 313 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 NXPH3O95157 252 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 HLA-HP01893 362 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 PSMB6P28072 239 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 RGS7BPQ6MZT1 257 aaPredicted RBP13.75□□□□□ -0.21
TIMP3-201ENST00000266085 OR2AK2Q8NG84 335 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 A0A1W2PR80 420 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 SPRY1O43609 319 aaPredicted RBP13.75□□□□□ -0.21
TIMP3-201ENST00000266085 TPPPO94811 219 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 PNLIPP16233 465 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 PNLIPRP3Q17RR3 467 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 TMUB2Q71RG4 321 aa13.75□□□□□ -0.21
TIMP3-201ENST00000266085 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms