RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 HERPUD1Q15011 391 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ELOA3BQ3SY89 546 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 FAM46CQ5VWP2 391 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 CLEC18BQ6UXF7 455 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 SLC35E3Q7Z769 313 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ELOA3Q8NG57 546 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LYSMD1Q96S90 227 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 C12orf49Q9H741 205 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LPAR2Q9HBW0 351 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 SLC17A5Q9NRA2 495 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 KLHL28Q9NXS3 571 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 FOXD3Q9UJU5 478 aaPredicted RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 SLC22A13Q9Y226 551 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 CACNA1IQ9P0X4 2223 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TMEM269A0A1B0GVZ9 245 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TCRBV21S2A2A0A5A6 115 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 H7C1C5 153 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 HSD17B6O14756 317 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 NDUFS4O43181 175 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TBX19O60806 448 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ABHD16AO95870 558 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 COL9A1P20849 921 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LCN6P62502 163 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 GGTLC2Q14390 218 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 P2RY6Q15077 328 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 RAB11BQ15907 218 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LINC01590Q5TEZ4 76 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 MDGA2Q7Z553 956 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ZNF679Q8IYX0 411 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TRAM1L1Q8N609 369 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ADGRG7Q96K78 797 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 C5orf66Q9H5L9 145 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 CD207Q9UJ71 328 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TMED3Q9Y3Q3 217 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 KIAA1549LQ6ZVL6 1849 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ASXL3Q9C0F0 2248 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 DCDC2BA2VCK2 349 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LMX1BO60663 402 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 JMJD7P0C870 316 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 FCGR2CP31995 323 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 UCP3P55916 312 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 PRPS1P60891 318 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 MLC1Q15049 377 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TMEM196Q5HYL7 178 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 SAPCD1Q5SSQ6 148 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 GLYATL3Q5SZD4 288 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 ZAR1Q86SH2 424 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TRAPPC6BQ86SZ2 158 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TMEM156Q8N614 296 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ZNF676Q8N7Q3 588 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 MFSD8Q8NHS3 518 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TSACCQ96A04 125 aaPredicted RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 A0A0A6YYD5 115 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 RAB27BO00194 218 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CDC40O60508 579 aaKnown RBP eCLIP7.79□□□□□ -1.16
VAPB-201ENST00000265619 GOSR1O95249 250 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 S1PR1P21453 382 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 DRD3P35462 400 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 LTBRP36941 435 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 APOBEC1P41238 236 aaKnown RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 RAB1AP62820 205 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 FAM166AQ6J272 317 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 KIRREL2Q6UWL6 708 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ZNF584Q8IVC4 421 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 NEK7Q8TDX7 302 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 MCHR2Q969V1 340 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CYP8B1Q9UNU6 501 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 KIF26BQ2KJY2 2108 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 DVL1O14640 695 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CST4P01036 141 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CD55P08174 381 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CD33P20138 364 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 TACR3P29371 465 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 OR3A1P47881 315 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ARRB1P49407 418 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 CLN3Q13286 438 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 BATFQ16520 125 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 TDRG1Q3Y452 100 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ZNF658BQ4V348 819 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 AWAT2Q6E213 333 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ABLIM2Q6H8Q1 611 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 LCN10Q6JVE6 187 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ZNF880Q6PDB4 577 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 SUMF2Q8NBJ7 301 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 POC1AQ8NBT0 407 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 FAM46BQ96A09 425 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CMKLR1Q99788 373 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ACTR3CQ9C0K3 210 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 THAP10Q9P2Z0 257 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 SERTAD3Q9UJW9 196 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 IKZF2Q9UKS7 526 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms