RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 OR2T8A6NH00 312 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR4C46A6NHA9 309 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 PPP6CO00743 305 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DLX1P56177 255 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR52I2Q8NH67 350 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 LINC00052Q96N35 136 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 B3GALT4O96024 378 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ALPLP05186 524 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 MICBQ29980 383 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 FNDC7Q5VTL7 733 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF768Q9H5H4 540 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 CHST2Q9Y4C5 530 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 A0A0A6YYJ9 748 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TRIM77I1YAP6 450 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 M0R1X1 148 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR2F1Q13607 317 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 FAAP20Q6NZ36 180 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SLC39A11Q8N1S5 342 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 PCOLCE2Q9UKZ9 415 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 H7C2G1 150 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TBX19O60806 448 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TNFRSF1AP19438 455 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ORM2P19652 201 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM183BQ1AE95 376 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM179BQ7Z7N9 219 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SLC7A10Q9NS82 523 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 KRASP01116 189 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SPRED1Q7Z699 444 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SCD5Q86SK9 330 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ETFBKMTQ8IXQ9 262 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR4S1Q8NGB4 309 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 UBE2MP61081 183 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR1N2Q8NGR9 330 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1B0GVG6 124 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ACP1P24666 158 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PSMB6P28072 239 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CCR9P51686 369 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PRRX1P54821 245 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ANKRD34AQ69YU3 496 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 HSD3B7Q9H2F3 369 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PSORS1C1Q9UIG5 152 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 B4GALT3O60512 393 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 HIST1H1CP16403 213 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CD27P26842 260 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CEACAM6P40199 344 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 SSX1Q16384 188 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 OR52L2PQ8NGH6 319 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 DIMT1Q9UNQ2 313 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 SNED1Q8TER0 1413 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 TCRBV3S1A0A5B6 114 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF865P0CJ78 1059 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 WDR74Q6RFH5 385 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 RTL10Q7L3V2 364 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 LYG1Q8N1E2 194 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 OR2I1PQ8NGU4 316 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 IL22RA2Q969J5 263 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 OR5M11Q96RB7 305 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CNTD2Q9H8S5 307 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 GDF2Q9UK05 429 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CRYABP02511 175 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 BAK1Q16611 211 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CD276Q5ZPR3 534 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 RBM45Q8IUH3 476 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF519Q8TB69 540 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 NUDT3O95989 172 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 ALDOCP09972 364 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 AGBL4Q5VU57 503 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 RHOXF1Q8NHV9 184 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 NFAT5O94916 1531 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CSN3P07498 182 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 KIR2DL1P43626 348 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 KIR2DL2P43627 348 aaPredicted RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 SLC48A1Q6P1K1 146 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 PBOV1Q9GZY1 135 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM30CPA0ZSE6 113 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 MEX3AA1L020 520 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 OSR2Q8N2R0 312 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
PTPN4-201ENST00000263708 NAA50Q9GZZ1 169 aaKnown RBP10.3□□□□□ -0.76
PTPN4-201ENST00000263708 TAF1P21675 1872 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 TMPRSS11DO60235 418 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 GPANK1O95872 356 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 CAMPP49913 170 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ADPRHL1Q8NDY3 354 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 NIPSNAP1Q9BPW8 284 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1W2PRD5 423 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1W2PRF3 423 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 A0A1W2PRM7 423 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 PMS2P11Q13670 270 aa10.29□□□□□ -0.76
PTPN4-201ENST00000263708 ABHD14AQ9BUJ0 271 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms