RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IL32P24001 234 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 RRADP55042 308 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 GABREP78334 506 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 STK11Q15831 433 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 OR2A2Q6IF42 318 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 C6orf201Q7Z4U5 140 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 PLXDC1Q8IUK5 500 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 OR5AS1Q8N127 324 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 OR5H2Q8NGV7 314 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 WDR77Q9BQA1 342 aaPredicted RBP8.06□□□□□ -1.12
MSH4-201ENST00000263187 SLC2A4RGQ9NR83 387 aa8.06□□□□□ -1.12
MSH4-201ENST00000263187 IGKV1-9A0A0C4DH69 117 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 HSPB2A8KAH6 182 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 LRP3O75074 770 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 DUS4LO95620 317 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZNF17P17021 662 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 GALNSP34059 522 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 OPRM1P35372 400 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 SNU13P55769 128 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 CLDN17P56750 224 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 SSBP1Q04837 148 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 SMAD4Q13485 552 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 HSPB2Q16082 182 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 BAP18Q8IXM2 172 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 OR13G1Q8NGZ3 307 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TOMM40LQ969M1 308 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 GLS2Q9UI32 602 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 LOC390937A0A1W2PQ73 354 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ANKUB1A6NFN9 424 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 H7C2Y5 167 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 PIAS2O75928 621 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 BPNT1O95861 308 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 PATE4P0C8F1 98 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 SLC25A4P12235 298 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZNF43P17038 809 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 PVALBP20472 110 aaPredicted RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 ASCL1P50553 236 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TGIF1Q15583 401 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TSPO2Q5TGU0 170 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZNF441Q8N8Z8 693 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 OR4A4PQ8NGN8 299 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 MFSD8Q8NHS3 518 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZNF501Q96CX3 271 aaPredicted RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 FBXO17Q96EF6 278 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 PGAM5Q96HS1 289 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 CMSS1Q9BQ75 279 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 RBM24Q9BX46 236 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 DNTTIP1Q9H147 329 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 LSM5Q9Y4Y9 91 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ZNF726A6NNF4 738 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 FCGR2AP12318 317 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TPT1P13693 172 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 CBR1P16152 277 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 HIST1H1DP16402 221 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 SUPT4H1P63272 117 aaKnown RBP8.05□□□□□ -1.12
MSH4-201ENST00000263187 SCRN3Q0VDG4 424 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 NKAIN1Q4KMZ8 207 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 ANKRD37Q7Z713 158 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 HOGA1Q86XE5 327 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 OR2AE1Q8NHA4 323 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 POC1BQ8TC44 478 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 GNRHR2Q96P88 292 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 PIGMQ9H3S5 423 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 SDHAF3Q9NRP4 125 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 EML6Q6ZMW3 1958 aa8.05□□□□□ -1.12
MSH4-201ENST00000263187 TMEM14DPA8MWL7 114 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 TO15178 435 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 NUDT21O43809 227 aaKnown RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 FXYD4P59646 89 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 TMEM128Q5BJH2 165 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZNF837Q96EG3 531 aaPredicted RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 RTBDNQ9BSG5 229 aaPredicted RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 C20orf24Q9BUV8 137 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZNF629Q9UEG4 869 aaPredicted RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 FLVCR1Q9Y5Y0 555 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 SHANK1Q9Y566 2161 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 SPRY1O43609 319 aaPredicted RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 MED6O75586 246 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 IL2RAP01589 272 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 IGHG1P01857 330 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 MELTFP08582 738 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 RAB6AP20340 208 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 KCNJ3P48549 501 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 ACY1Q03154 408 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZNF345Q14585 488 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 LPCAT3Q6P1A2 487 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 SYT13Q7L8C5 426 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 C5orf24Q7Z6I8 188 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 D2HGDHQ8N465 521 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 EIF4E3Q8N5X7 224 aaKnown RBP8.04□□□□□ -1.12
MSH4-201ENST00000263187 ZDHHC22Q8N966 263 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 EDAQ92838 391 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 REEP6Q96HR9 211 aa8.04□□□□□ -1.12
MSH4-201ENST00000263187 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms