RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ZNF117Q03924 483 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 LHX8Q68G74 356 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 LYG2Q86SG7 212 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 UBALD2Q8IYN6 164 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 SPEM1Q8N4L4 309 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR4C16Q8NGL9 310 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 BTF3L4Q96K17 158 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 RPP25Q9BUL9 199 aaKnown RBP10.88□□□□□ -0.67
COL8A1-201ENST00000261037 TMPRSS13Q9BYE2 586 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR5H15A6NDH6 313 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 CYTIPO60759 359 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 JTBO76095 146 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 YBX1P67809 324 aaKnown RBP10.88□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 FOXB1Q99853 325 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 FAM90A27PA6NNH2 459 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 ABCD3P28288 659 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 FAHD1Q6P587 224 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 TP53I13Q8NBR0 393 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR52N4Q8NGI2 321 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 DYNC2LI1Q8TCX1 351 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 TNFRSF19Q9NS68 423 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
COL8A1-201ENST00000261037 PAPPA2Q9BXP8 1791 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 H7BYZ3 331 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 SLC25A4P12235 298 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 FAM53BQ14153 422 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 AMER3Q8N944 861 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 ADPRHL1Q8NDY3 354 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 LHX4Q969G2 390 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 MVB12AQ96EY5 273 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 LRFN3Q9BTN0 628 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 OR51I2Q9H344 312 aa10.88□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-201ENST00000261037 E5RGE8 158 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 FZD6O60353 706 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 MEOX1P50221 254 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 CLDN20P56880 219 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 GPNMBQ14956 572 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 BAK1Q16611 211 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 RNF151Q2KHN1 245 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 OR5AP2Q8NGF4 316 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 GALMQ96C23 342 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 NSG2Q9Y328 171 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 PTHLHP12272 177 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 CCL2P13500 99 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 DHRS13Q6UX07 377 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 PRSS41Q7RTY9 318 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 DEFB124Q8NES8 71 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 TRGV5A0A0B4J1U4 118 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 PDGFBP01127 241 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-201ENST00000261037 CELA2BP08218 269 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-201ENST00000261037 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 EVX1P49640 407 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 OR2B8PP59922 312 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 INSL4Q14641 139 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 SMIM21Q3B7S5 101 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 STUMQ69YW2 141 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 KMT5CQ86Y97 462 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 OR2I1PQ8NGU4 316 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 GNPNAT1Q96EK6 184 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-201ENST00000261037 AKR1E2Q96JD6 320 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 ARHGDIGQ99819 225 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 TSPAN12O95859 305 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 FUT6P51993 359 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 GSG1Q2KHT4 349 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 SPINK9Q5DT21 86 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 OR1F12Q8NHA8 337 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 C2orf50Q96LR7 162 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 CLEC1BQ9P126 229 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 CDC14BO60729 498 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 LIMK1P53667 647 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 RAB1AP62820 205 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 H3F3AP84243 136 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 DHODHQ02127 395 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
COL8A1-201ENST00000261037 RBP4P02753 201 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 C16orf47Q6ZP98 133 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-201ENST00000261037 CORO2AQ92828 525 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 DUS3LQ96G46 650 aaKnown RBP10.86□□□□□ -0.67
COL8A1-201ENST00000261037 HDGFL3Q9Y3E1 203 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 CCDC187A0A096LP49 1063 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 TRGV10A0A0A0MS01 117 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 IGHV5-51A0A0C4DH38 117 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 CLEC18AA5D8T8 446 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ALG1L2C9J202 215 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 GPR31O00270 319 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 ADRB1P08588 477 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-201ENST00000261037 AKR1C3P42330 323 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 GPR3P46089 330 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 CLEC18CQ8NCF0 446 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
COL8A1-201ENST00000261037 GOLT1BQ9Y3E0 138 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms