RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 STUB1Q9UNE7 303 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 LRBAP50851 2863 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 PIN1P1O15428 100 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 GPX5O75715 221 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 SERPINA3P01011 423 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 EFNB3Q15768 340 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 ZMAT1Q5H9K5 638 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 ASPHD2Q6ICH7 369 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 Q6ZR03 302 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 KRT74Q7RTS7 529 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 CEACAM19Q7Z692 300 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 TMEM200AQ86VY9 491 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 PARP16Q8N5Y8 322 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 CSNK2A3Q8NEV1 391 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 OR8G5Q8NG78 346 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 GTF3AQ92664 365 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 RPL3LQ92901 407 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 PPIL3Q9H2H8 161 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 PLEKHF2Q9H8W4 249 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 TAAR3PQ9P1P4 343 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 ENPP5Q9UJA9 477 aa13.5□□□□□ -0.25
CCDC90B-201ENST00000260054 ZNF816-ZNF321PA0A0X1KG74 233 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 TRDV1A0A1B0GX56 115 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ANKRD61A6NGH8 418 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 DANCRP0C864 163 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ZNF20P17024 532 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 EVX1P49640 407 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 DMRTC1Q5HYR2 192 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ZBTB37Q5TC79 503 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 TMEM42Q69YG0 159 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 FBXL14Q8N1E6 418 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 UBASH3BQ8TF42 649 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 C10orf35Q96D05 121 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 CHCHD6Q9BRQ6 235 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 PAPOLGQ9BWT3 736 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 NAA50Q9GZZ1 169 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 EXOSC4Q9NPD3 245 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 NOX4Q9NPH5 578 aa13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 MRPL15Q9P015 296 aaKnown RBP13.49□□□□□ -0.25
CCDC90B-201ENST00000260054 RAI1Q7Z5J4 1906 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 A0A1B0GVG6 124 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 ANKRD30BLA7E2S9 258 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 B9A039 149 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 GATBO75879 557 aaKnown RBP13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 CST4P01036 141 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 CD2P06729 351 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 SOD3P08294 240 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 GALP22466 123 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 CA6P23280 308 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 MAPK3P27361 379 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 GNALP38405 381 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 NKPD1Q17RQ9 610 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 GPR107Q5VW38 600 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 FTMTQ8N4E7 242 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 PIGCQ92535 297 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 FAM210AQ96ND0 272 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 SLC30A2Q9BRI3 323 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 CHST5Q9GZS9 411 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 TAS2R4Q9NYW5 299 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 GPR160Q9UJ42 338 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 CELSR2Q9HCU4 2923 aa13.48□□□□□ -0.25
CCDC90B-201ENST00000260054 FBN2P35556 2912 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 ZSCAN5BA6NJL1 495 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 ZNF850A8MQ14 1090 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 GMDSO60547 372 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CD8AP01732 235 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 UCHL1P09936 223 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 PRDX4Q13162 271 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CLVS2Q5SYC1 327 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 SLC16A12Q6ZSM3 486 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 SERPINA12Q8IW75 414 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 PP6455Q8WZ26 134 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 PIGTQ969N2 578 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CENPOQ9BU64 300 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 GPR173Q9NS66 373 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 TXNL4BQ9NX01 149 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 SSR3Q9UNL2 185 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 TRAV8-7A0A075B6U6 113 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 PLSCR5A0PG75 271 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 H0YL77 283 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 MLNRO43193 412 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 AIREO43918 545 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 NRASP01111 189 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 RAF1P04049 648 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 NAT2P11245 290 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 FGF9P31371 208 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 UBE2V2Q15819 145 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms