RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SLC35F2Q8IXU6 374 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 C11orf40Q8WZ69 217 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 DNAJA3Q96EY1 480 aa6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPL16Q9NX20 251 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-201ENST00000257290 MYBPHLA2RUH7 354 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 GJB3O75712 270 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SLCO2B1O94956 709 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SHC1P29353 583 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OPRD1P41143 372 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 MMP16P51512 607 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 HES3Q5TGS1 186 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SYT9Q86SS6 491 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ISCA2Q86U28 154 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 CALHM1Q8IU99 346 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM45BQ96B21 275 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 TRMT61BQ9BVS5 477 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC39A9Q9NUM3 307 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 LIN7CQ9NUP9 197 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ST3GAL6Q9Y274 331 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF43P17038 809 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OR1E2P47887 323 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 CCR5P51681 352 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 CLDN6P56747 220 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RAB38P57729 211 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 INSM1Q01101 510 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 CCSMST1Q4G0I0 132 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 PLAC9Q5JTB6 97 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4D5Q8NGN0 318 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 HSF4Q9ULV5 492 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 GPANK1O95872 356 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 TYMSP04818 313 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 HTR1DP28221 377 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 TMPRSS3P57727 454 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RPS20P60866 119 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ERVS71-1P61550 626 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 MPV17LQ2QL34 196 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 PKDCCQ504Y2 493 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 Q6ZPB1 254 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 GPRIN1Q7Z2K8 1008 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 WFDC8Q8IUA0 241 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 MAFAQ8NHW3 353 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC25A44Q96H78 314 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 LCORQ96JN0 433 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF39Q9H2S5 420 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPS18CQ9Y3D5 142 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 FLVCR1Q9Y5Y0 555 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 HS3ST4Q9Y661 456 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 GRM6O15303 877 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 AZU1P20160 251 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 NTSR1P30989 418 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 SSR2P43308 183 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 B4GALNT1Q00973 533 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF44Q7L0R7 432 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ABHD6Q9BV23 337 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 COL25A1Q9BXS0 654 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A0G2JMM0 328 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 LOC102723971A0A1B0GUV8 181 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A1W2PPB8 328 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 TCRBV5S2A0A599 114 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 KIR3DP1A8MWS1 328 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 HPXP02790 462 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 PNLIPRP2P54317 469 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 MMDQ15546 238 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 C1orf220Q5T0J3 134 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 RIMKLAQ8IXN7 391 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF101Q8IZC7 436 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OR2T33Q8NG76 320 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OR9Q2Q8NGE9 314 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 OR52E4Q8NGH9 312 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
PDGFRA-201ENST00000257290 NMBRP28336 390 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 G6PCP35575 357 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TM4SF4P48230 202 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SNRPGP62308 76 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 LTBQ06643 244 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MEP1BQ16820 701 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MDGA1Q8NFP4 955 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MARCH1Q8TCQ1 289 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SAMD8Q96LT4 415 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 UHRF2Q96PU4 802 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 ATG10Q9H0Y0 220 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 HHATLQ9HCP6 504 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 CBLCQ9ULV8 474 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TNFSF18Q9UNG2 199 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 SIRPB1O00241 398 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 MSTNO14793 375 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 FGF17O60258 216 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 NPIPB7O75200 414 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 NRASP01111 189 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 HRASP01112 189 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 KRASP01116 189 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 THY1P04216 161 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4A8P0C604 315 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 FCARP24071 287 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 AMMECR1LQ6DCA0 310 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 TTC9BQ8N6N2 239 aa6.09□□□□□ -1.43
PDGFRA-201ENST00000257290 DCBLD1Q8N8Z6 715 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms