RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RAB6AP20340 208 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 OR10A3P58181 314 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 DYRK1AQ13627 763 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 KDM8Q8N371 416 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 SMIM19Q96E16 107 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 J3QRK9 145 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PNPP00491 289 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 ATP5J2P56134 94 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 NRN1LQ496H8 165 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 SFXN4Q6P4A7 337 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 CNIH2Q6PI25 160 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 LINC00299Q6ZSB3 139 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 MED20Q9H944 212 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 MAB21L2Q9Y586 359 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 C7orf72A4D263 438 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 HS3ST1O14792 307 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF239Q16600 458 aaKnown RBP11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 NAA40Q86UY6 237 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 RDH5Q92781 318 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 CDCA4Q9BXL8 241 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 OR2H1Q9GZK4 316 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 LYRM1O43325 122 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 ADGRG7Q96K78 797 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 HTR2AP28223 471 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 PSG6Q00889 435 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 GPR157Q5UAW9 335 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 FBXW12Q6X9E4 464 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 Q6ZRG5 221 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 PRSS41Q7RTY9 318 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF75AQ96N20 296 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 EML2O95834 649 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 EPPINO95925 133 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 ZBTB25P24278 435 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 PTGFRP43088 359 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 NHLH1Q02575 133 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 TBR1Q16650 682 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 SFRP5Q5T4F7 317 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 FAHD1Q6P587 224 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 AMER3Q8N944 861 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 SIGLEC7Q9Y286 467 aa11.92□□□□□ -0.5
PRPF38A-201ENST00000257181 EPXP11678 715 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 AADACP22760 399 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 CAMLGP49069 296 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 GHITMQ9H3K2 345 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 ZSCAN5BA6NJL1 495 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 J3QT63 122 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 SEMA7AO75326 666 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 TPPPO94811 219 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 DCTDP32321 178 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 SOX18P35713 384 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF266Q14584 549 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 SLC25A26Q70HW3 274 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 SLC25A37Q9NYZ2 338 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 COL4A6Q14031 1691 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 IGLV3-12A0A075B6K2 115 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 TRAV1-2A0A0B4J238 106 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 A0A1W2PNV4 684 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 RPS25P62851 125 aaKnown RBP11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 COL19A1Q14993 1142 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 MRPL15Q9P015 296 aaKnown RBP11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 ADRA2CP18825 462 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 KRBOX4Q5JUW0 171 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 ATP5SQ99766 215 aa11.91□□□□□ -0.5
PRPF38A-201ENST00000257181 HLA-HP01893 362 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 SMIM10L1P0DMW3 83 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 HNF4GQ14541 408 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ST6GALNAC3Q8NDV1 305 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 SMIM10Q96HG1 83 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ASB1Q9Y576 335 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 A0A1W2PN81 502 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 NPIPB13A6NJU9 1138 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 NPIPB4C9JG80 1138 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 LGALS8O00214 317 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 OR4A8P0C604 315 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 CHRNA7P36544 502 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 CEBPGP53567 150 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 CDK5R1Q15078 307 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 SPSB2Q99619 263 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 FAM53CQ9NYF3 392 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 LSM5Q9Y4Y9 91 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms