RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 HIST3H3Q16695 136 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM207Q6UWW9 146 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ATP5SQ99766 215 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 RARRES3Q9UL19 164 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMED7Q9Y3B3 224 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 NXPH2O95156 264 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 GCGP01275 180 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PGA3P0DJD8 388 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 CHRNB4P30926 498 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 SRYQ05066 204 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC48A1Q6P1K1 146 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF595Q8IYB9 648 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM104Q8NE00 496 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 FGF13Q92913 245 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC35A4Q96G79 324 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 GAGE10A6NGK3 116 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PSMB5P28074 263 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 SCAND1P57086 179 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMPRSS11FQ6ZWK6 438 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF740Q8NDX6 193 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 COA3Q9Y2R0 106 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 EVPLQ92817 2033 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 A0A1B0GV90 55 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 GYPAP02724 150 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 INHBBP09529 407 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM87AP0C7U9 286 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR8G1Q15617 311 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 C12orf73Q69YU5 71 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 PTOV1Q86YD1 416 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR2M7Q8NG81 312 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR51B6Q9H340 312 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 LRIT1Q9P2V4 623 aa11.91□□□□□ -0.5
PCDHGA3-201ENST00000253812 GP1BAP07359 652 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 TBXA2RP21731 343 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 H3BP45 60 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 TNFRSF10CO14798 259 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 ADAM11O75078 769 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 CLDN17P56750 224 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 PRSS3P2Q8NHM4 247 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 ABHD1Q96SE0 405 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 BCL2L10Q9HD36 194 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 MFSD2BA6NFX1 497 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 HMGN4O00479 90 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 CLEC3BP05452 202 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 HBQ1P09105 142 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 DLK1P80370 383 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 OLIG3Q7RTU3 272 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 C19orf47Q8N9M1 422 aaKnown RBP11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 FOXJ3Q9UPW0 622 aa11.9□□□□□ -0.5
PCDHGA3-201ENST00000253812 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 PAPPAQ13219 1627 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 C9orf170A2RU37 121 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 SFT2D2O95562 160 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 OPN1LWP04000 364 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 MVDP53602 400 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 CLDN2P57739 230 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 BPIFB3P59826 476 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 TMEM176BQ3YBM2 270 aaPredicted RBP11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 EIF4E3Q8N5X7 224 aaKnown RBP11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 STACQ99469 402 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 NDFIP1Q9BT67 221 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 PRSS50Q9UI38 385 aa11.9□□□□□ -0.51
PCDHGA3-201ENST00000253812 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 PQLC2LA1A4F0 135 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 ARPC3O15145 178 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 TMEM11P17152 192 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 RPL7P18124 248 aaKnown RBP11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 IL13RA2Q14627 380 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 RASL12Q9NYN1 266 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 V9GYH0 126 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 EFSO43281 561 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 ZNF737O75373 536 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 KLKB1P03952 638 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 NKAIN2Q5VXU1 208 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 Q7L0L9 218 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 SEMA7AO75326 666 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 NMBP08949 121 aa11.89□□□□□ -0.51
PCDHGA3-201ENST00000253812 OR5G3P0C626 314 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms