RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 GABRA6Q16445 453 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 IL22RA1Q8N6P7 574 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 SMIM4Q8WVI0 70 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 OR2A7Q96R45 310 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 CTDSP1Q9GZU7 261 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
COLGALT1-201ENST00000252599 TRBC2A0A5B9 178 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 CLDN34H7C241 214 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 PIGPP57054 158 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 TGFBR3Q03167 851 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 HSPB3Q12988 150 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 NOXRED1Q6NXP6 359 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 DNASE2BQ8WZ79 361 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 RAB8BQ92930 207 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 SLC12A9Q9BXP2 914 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 HDAC8Q9BY41 377 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 SLC25A18Q9H1K4 315 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 THYN1Q9P016 225 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 KCNE5Q9UJ90 142 aa12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 TIMM8BQ9Y5J9 83 aaPredicted RBP12.02□□□□□ -0.48
COLGALT1-201ENST00000252599 CTSVO60911 334 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 GASTP01350 101 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 IL3P08700 152 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 PSMB6P28072 239 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 CMPK1P30085 196 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 PET117Q6UWS5 81 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 SYNPRQ8TBG9 265 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 XAGE5Q8WWM1 108 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 ATP5SQ99766 215 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 OR51I1Q9H343 314 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 WNT9AO14904 365 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 GDF9O60383 454 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 OR2T7P0C7T2 308 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 SNRPNP63162 240 aaKnown RBP12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 EFNB1P98172 346 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 PAX2Q02962 417 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 SBSNQ6UWP8 590 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 TVP23CQ96ET8 276 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 IL17FQ96PD4 163 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 EGLN1Q9GZT9 426 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 VPS29Q9UBQ0 182 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 COX11Q9Y6N1 276 aa12.02□□□□□ -0.49
COLGALT1-201ENST00000252599 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 OR6C6A6NF89 314 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 B4DEV8 164 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.497e-7■■■■□ 23.7
COLGALT1-201ENST00000252599 RAMP1O60894 148 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CHRM2P08172 466 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 LAG3P18627 525 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 GTF3C1Q12789 2109 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 UEVLDQ8IX04 471 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 GALNT16Q8N428 558 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 GRHL3Q8TE85 626 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 PILRBQ9UKJ0 227 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 ZNF835Q9Y2P0 537 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 SPINT1O43278 529 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 FGF17O60258 216 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 NDUFB6O95139 128 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CEACAM6P40199 344 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CD96P40200 585 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 SLC6A11P48066 632 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 GAS1P54826 345 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 TIAL1Q01085 375 aaKnown RBP eCLIP12.01□□□□□ -0.493e-9■□□□□ 9.5
COLGALT1-201ENST00000252599 SPATA45Q537H7 98 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CHST4Q8NCG5 386 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 COPS7AQ9UBW8 275 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CD14P08571 375 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 KLK2P20151 261 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 IGFBP4P22692 258 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 BSGP35613 385 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 CDK3Q00526 305 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 LINC00696Q6ZRV3 163 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 PHYKPLQ8IUZ5 450 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 STT3BQ8TCJ2 826 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 PLD4Q96BZ4 506 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 NDC1Q9BTX1 674 aa12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
COLGALT1-201ENST00000252599 GLOD5A6NK44 160 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 HIDE1A8MVS5 230 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 B4DGG1 531 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 G3V3Q6 166 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 M0QYG6 137 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 EIF1AYO14602 144 aaKnown RBP12□□□□□ -0.49
COLGALT1-201ENST00000252599 OR6A2O95222 327 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 CLDN1O95832 211 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 KLK1P06870 262 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 TFPIP10646 304 aa12□□□□□ -0.49
COLGALT1-201ENST00000252599 EIF1AXP47813 144 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms