RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 OR51L1Q8NGJ5 315 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 OR9Q1Q8NGQ5 310 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 LINC01006Q8NI28 216 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 MCUR1Q96AQ8 359 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 KCNJ15Q99712 375 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 COPS4Q9BT78 406 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 TRIM15Q9C019 465 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 TLNRD1Q9H1K6 362 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 RNPEPL1Q9HAU8 725 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 MED4Q9NPJ6 270 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 C14orf119Q9NWQ9 140 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 KIF17Q9P2E2 1029 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4Q9UBX2 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 KPTNQ9Y664 436 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 TET2Q6N021 2002 aaPredicted RBP8.48□□□□□ -1.05
VPS50-201ENST00000251739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.48□□□□□ -1.05
VPS50-201ENST00000251739 hCG_38984A0A1B0GV85 526 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 DHRS12A0PJE2 317 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 M0QZ24 198 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 SNX3O60493 162 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 GYPBP06028 91 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 SPARCP09486 303 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 MUC1P15941 1255 aaPredicted RBP8.48□□□□□ -1.05
VPS50-201ENST00000251739 AMY2BP19961 511 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 ATP6V1B2P21281 511 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 FMO3P31513 532 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 ARF6P62330 175 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 CSNK2BP67870 215 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 FAM3AP98173 230 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 MZT1Q08AG7 82 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 SPATS1Q496A3 300 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 CDONQ4KMG0 1287 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 WDR38Q5JTN6 314 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 ASPHD2Q6ICH7 369 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 LINC00471Q8N535 108 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 OR4Q3Q8NH05 313 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 C8orf46Q8TAG6 207 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 TBC1D15Q8TC07 691 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 RNF133Q8WVZ7 376 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 LHX4Q969G2 390 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 ELAC2Q9BQ52 826 aaKnown RBP8.48□□□□□ -1.05
VPS50-201ENST00000251739 MMP27Q9H306 513 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 VNN3Q9NY84 501 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 ZNRD1Q9P1U0 126 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 DSCAML1Q8TD84 2053 aa8.48□□□□□ -1.05
VPS50-201ENST00000251739 PLXNB1O43157 2135 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 IGHV3OR15-7A0A075B7D8 119 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 hCG_1807616A0A1W2PRN6 198 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 A6NLC8 198 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 ZNF593O00488 134 aaPredicted RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 GASTP01350 101 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 CRYBA1P05813 215 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 GRPP07492 148 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 CLUP10909 449 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 TGM4P49221 684 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 GRB2P62993 217 aaKnown RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 TAF9Q16594 264 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 HSP90B2PQ58FF3 399 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 ATPAF1Q5TC12 328 aaPredicted RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 STUMQ69YW2 141 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 Q6ZSV7 163 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 VMO1Q7Z5L0 202 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 FAM216BQ8N7L0 139 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 Q8N7P7 452 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 ZSCAN4Q8NAM6 433 aaPredicted RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 LRRC29Q8WV35 223 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 ST8SIA4Q92187 359 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 SGK3Q96BR1 496 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 C12orf43Q96C57 262 aaKnown RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 CDRT15Q96T59 188 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 AMELYQ99218 206 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 RBM4BQ9BQ04 359 aaKnown RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 DGCR6LQ9BY27 220 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 TOR3AQ9H497 397 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 PPP1R3EQ9H7J1 279 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 TBC1D23Q9NUY8 699 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 ZNF319Q9P2F9 582 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 PRPF19Q9UMS4 504 aaKnown RBP8.47□□□□□ -1.05
VPS50-201ENST00000251739 BAIAP2Q9UQB8 552 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 RNF114Q9Y508 228 aa8.47□□□□□ -1.05
VPS50-201ENST00000251739 A0A1B0GVI7 797 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TCRBV5S2A0A599 114 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 ANKRD30BLA7E2S9 258 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TNFRSF11BO00300 401 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 ACOT8O14734 319 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TIMM23O14925 209 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TIPRLO75663 272 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 SELLP14151 372 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 OPRL1P41146 370 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 SLC15A1P46059 708 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 CX3CR1P49238 355 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 BLVRAP53004 296 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 MXRA7P84157 204 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 MICBQ29980 383 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms