RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 CLDN17P56750 224 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ELP2Q6IA86 826 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ARMC10Q8N2F6 343 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 TMEM185AQ8NFB2 350 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 OR14K1Q8NGZ2 314 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 SSC4DQ8WTU2 575 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ARHGAP5-AS1Q96IT6 56 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 CCDC74BQ96LY2 380 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 GHRLQ9UBU3 117 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 CHCHD2Q9Y6H1 151 aaPredicted RBP14.47□□□□□ -0.09
HOXD3-201ENST00000249440 A0A1W2PP11 408 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ECH1Q13011 328 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ARFRP1Q13795 201 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 SGCAQ16586 387 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 PRAMEF20Q5VT98 475 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 MRPL14Q6P1L8 145 aaKnown RBP14.47□□□□□ -0.09
HOXD3-201ENST00000249440 PGAM5Q96HS1 289 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 ZNF416Q9BWM5 594 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 OR10A2Q9H208 303 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 C5orf66Q9H5L9 145 aa14.47□□□□□ -0.09
HOXD3-201ENST00000249440 IGKV1-9A0A0C4DH69 117 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 K7ESF4 209 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 MFNGO00587 321 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 ANOS1P23352 680 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 EIF3IQ13347 325 aaKnown RBP14.46□□□□□ -0.09
HOXD3-201ENST00000249440 CCDC36Q8IYA8 594 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 GJC3Q8NFK1 279 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 OR5H2Q8NGV7 314 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 CDC6Q99741 560 aa14.46□□□□□ -0.09
HOXD3-201ENST00000249440 LY6G6EA0A0G2JKS1 128 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 GP1BAP07359 652 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 KLK2P20151 261 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 MSR1P21757 451 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 NPY4RP50391 375 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 ZNF273Q14593 569 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 KISS1Q15726 138 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 FAM89BQ8N5H3 189 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 OR51T1Q8NGJ9 327 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 NELFAQ9H3P2 528 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 ZNF160Q9HCG1 818 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 C12orf4Q9NQ89 552 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 CSAG2Q9Y5P2 127 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 U3KQA8 63 aa14.46□□□□□ -0.1
HOXD3-201ENST00000249440 A0A087WZY1 265 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 TPD52L2O43399 206 aaKnown RBP14.45□□□□□ -0.1
HOXD3-201ENST00000249440 SIGLEC6O43699 453 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 RAD51DO75771 328 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 SFT2D2O95562 160 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 PGAM2P15259 253 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 CSNK1A1P48729 337 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 PPIAP62937 165 aaKnown RBP14.45□□□□□ -0.1
HOXD3-201ENST00000249440 GTPBP8Q8N3Z3 284 aaPredicted RBP14.45□□□□□ -0.1
HOXD3-201ENST00000249440 DCUN1D4Q92564 292 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 RAB18Q9NP72 206 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 ZC4H2Q9NQZ6 224 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 MYO7BQ6PIF6 2116 aa14.45□□□□□ -0.1
HOXD3-201ENST00000249440 TRBV6-7A0A0A0MS04 114 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 A0A0B4J2A0 478 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 CDK2AP1O14519 115 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 PRF1P14222 555 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 AMY2BP19961 511 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 FPR2P25090 351 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 PTGFRP43088 359 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 ALDH3B1P43353 468 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 OR3A2P47893 321 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 H3F3AP84243 136 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 UNQ6126/PRO20091Q6UXV3 157 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 OR5AP2Q8NGF4 316 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 CLDN23Q96B33 292 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 PIK3IP1Q96FE7 263 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 PIGMQ9H3S5 423 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 AKIRIN1Q9H9L7 192 aaPredicted RBP14.44□□□□□ -0.1
HOXD3-201ENST00000249440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.44□□□□□ -0.1
HOXD3-201ENST00000249440 SHPKQ9UHJ6 478 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 IGLV3-1P01715 115 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 SLC6A9P48067 706 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 DHPSP49366 369 aaPredicted RBP14.44□□□□□ -0.1
HOXD3-201ENST00000249440 C10orf128Q5T292 105 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 PEG10Q86TG7 708 aaKnown RBP14.44□□□□□ -0.1
HOXD3-201ENST00000249440 STOML3Q8TAV4 291 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 TMEM230Q96A57 120 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 ST6GALNAC5Q9BVH7 336 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 WDR54Q9H977 334 aa14.44□□□□□ -0.1
HOXD3-201ENST00000249440 TEX13DA0A0J9YY54 714 aaPredicted RBP14.43□□□□□ -0.1
HOXD3-201ENST00000249440 A0A0U1RQV5 110 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 E9PLN8 166 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 F5H5K5 113 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 TRIM77I1YAP6 450 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 EIF1BO60739 113 aaKnown RBP14.43□□□□□ -0.1
HOXD3-201ENST00000249440 VAMP5O95183 116 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 THBS4P35443 961 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 TAS2R46P59540 309 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 PCOLCEQ15113 449 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 LYSMD4Q5XG99 296 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 OR5D18Q8NGL1 313 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 SAP25Q8TEE9 199 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 S100A13Q99584 98 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 OCIAD1Q9NX40 245 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 NXT1Q9UKK6 140 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms