RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CGGBP1Q9UFW8 167 aaPredicted RBP11.13□□□□□ -0.63
LSM8-201ENST00000249299 KCNN3Q9UGI6 736 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 PIGLQ9Y2B2 252 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
LSM8-201ENST00000249299 A0A075B6Q4 140 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 GGT3PA6NGU5 568 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 ZNF250P15622 560 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 PRKACBP22694 351 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 ACKR3P25106 362 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 BDKRB2P30411 391 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 CALCRP30988 508 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 SELENOVP59797 346 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 TNK1Q13470 666 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 GLT8D1Q68CQ7 371 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 OR1M1Q8NGA1 313 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 OR2AE1Q8NHA4 323 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 KLF14Q8TD94 323 aaPredicted RBP11.12□□□□□ -0.63
LSM8-201ENST00000249299 FAM222BQ8WU58 562 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 SLIRPQ9GZT3 109 aaKnown RBP11.12□□□□□ -0.63
LSM8-201ENST00000249299 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
LSM8-201ENST00000249299 MMP27Q9H306 513 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 PTTG3PQ9NZH4 202 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 V9GY05 133 aa11.12□□□□□ -0.63
LSM8-201ENST00000249299 TRAV8-7A0A075B6U6 113 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 A0A1B0GWJ7 208 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 AIPO00170 330 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 MAGEB3O15480 346 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 PRF1P14222 555 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 IGFBP2P18065 325 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 ANOS1P23352 680 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 GCH1P30793 250 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 EVX1P49640 407 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 RIN1Q13671 783 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 CNN3Q15417 329 aaKnown RBP11.11□□□□□ -0.63
LSM8-201ENST00000249299 CDSNQ15517 529 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 CEP78Q5JTW2 689 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 RGS7BPQ6MZT1 257 aaPredicted RBP11.11□□□□□ -0.63
LSM8-201ENST00000249299 ACBD4Q8NC06 268 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 SLC25A40Q8TBP6 338 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 CMBLQ96DG6 245 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 OR2J1Q9GZK6 312 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 ABRACLQ9P1F3 81 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 ANKHD1Q8IWZ3 2542 aaKnown RBP11.11□□□□□ -0.63
LSM8-201ENST00000249299 RTTNQ86VV8 2226 aa11.11□□□□□ -0.63
LSM8-201ENST00000249299 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 A0A1W2PPK0 400 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 ANXA2P2A6NMY6 339 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 IFITM5A6NNB3 132 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 ANKRD30BLA7E2S9 258 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 GMDSO60547 372 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 NRASP01111 189 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 IGHV3-13P01766 116 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 FAM157BP0CG42 384 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 FAHP16930 419 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 ADRA2CP18825 462 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 ATF1P18846 271 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 MAGEB1P43366 347 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 KIR2DL3P43628 341 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 FUT6P51993 359 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
LSM8-201ENST00000249299 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 C1orf100Q5SVJ3 147 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 LYPD6Q86Y78 171 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 SPERTQ8NA61 448 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 SSC4DQ8WTU2 575 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 TMEM171Q8WVE6 324 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 SOX7Q9BT81 388 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 DCUN1D5Q9BTE7 237 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 TPK1Q9H3S4 243 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 METTL17Q9H7H0 456 aaPredicted RBP11.1□□□□□ -0.63
LSM8-201ENST00000249299 CYSLTR2Q9NS75 346 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 TAS2R4Q9NYW5 299 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
LSM8-201ENST00000249299 FBXO9Q9UK97 447 aaPredicted RBP11.1□□□□□ -0.63
LSM8-201ENST00000249299 SLC7A11Q9UPY5 501 aa11.1□□□□□ -0.63
LSM8-201ENST00000249299 A0A0G2JK05 382 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ABCD4O14678 606 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 CLPXO76031 633 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 CD3EP07766 207 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 TGFBR1P36897 503 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MXD1Q05195 221 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 PSG7Q13046 419 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 HLXQ14774 488 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms