RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ZNF260Q3ZCT1 412 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 SFRP5Q5T4F7 317 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 TFAP2EQ6VUC0 442 aa13.87□□□□□ -0.19
LRFN1-201ENST00000248668 SNRPGP15A8MWD9 76 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 CCSO14618 274 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 CXCL13O43927 109 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 CRTAPO75718 401 aaPredicted RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 CD63P08962 238 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 OR4E1P0C645 316 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 JMJD7P0C870 316 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 HRH1P35367 487 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 RAB11FIP2Q7L804 512 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 SFXN2Q96NB2 322 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 MED13Q9UHV7 2174 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 DHHO43323 396 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 CBR3O75828 277 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 ENDOGQ14249 297 aaKnown RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF169Q14929 603 aaPredicted RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 RNASE10Q5GAN6 216 aaKnown RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 SPINK14Q6IE38 97 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 BEST3Q8N1M1 668 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 SPICQ8N5J4 248 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 ZIC4Q8N9L1 334 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 TMEM229BQ8NBD8 167 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 C2CD4CQ8TF44 421 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 LYZL4Q96KX0 146 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 UTP23Q9BRU9 249 aaKnown RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 DEPPQ9NTK1 212 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 A0A087WZY1 265 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 A0A0A6YYD4 124 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 IGKV1-9A0A0C4DH69 117 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 L7N2F9 121 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 SGCEO43556 437 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 PMP2P02689 132 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 GIPP09681 153 aaPredicted RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 LRRC37A5PQ49AS3 106 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
LRFN1-201ENST00000248668 C1QL2Q7Z5L3 287 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 OR2AE1Q8NHA4 323 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 MAFIPQ8WZ33 124 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 PIGTQ969N2 578 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 PIGQQ9BRB3 760 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 NELFAQ9H3P2 528 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 KCNK7Q9Y2U2 307 aa13.86□□□□□ -0.19
LRFN1-201ENST00000248668 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 QRFPP83859 136 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 BAMBIQ13145 260 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 OR13C8Q8NGS7 320 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 AQP3Q92482 292 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 LDAHQ9H6V9 325 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 P4HTMQ9NXG6 502 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 OPN4Q9UHM6 478 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 PINLYPA6NC86 204 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 F8W036 122 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 ATG12O94817 140 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF735P0CB33 412 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 CSNK2A1P68400 391 aaPredicted RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 OPCMLQ14982 345 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 ACER2Q5QJU3 275 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 C6orf15Q6UXA7 325 aaPredicted RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 LURAP1LQ8IV03 231 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 NAA11Q9BSU3 229 aaPredicted RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 SH2D2AQ9NP31 389 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 F5H5P2 479 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 BPNT1O95861 308 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 ITGB2P05107 769 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 B4GALT1P15291 398 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 RAP2BP61225 183 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 RAC1P63000 192 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 SORDQ00796 357 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 SRYQ05066 204 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 TMEM123Q8N131 208 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 BOLLQ8N9W6 283 aaKnown RBP13.85□□□□□ -0.19
LRFN1-201ENST00000248668 CASTOR1Q8WTX7 329 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 FBXO17Q96EF6 278 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 CRLF2Q9HC73 371 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 PTTG3PQ9NZH4 202 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 VSIG4Q9Y279 399 aa13.85□□□□□ -0.19
LRFN1-201ENST00000248668 GDF1P27539 372 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 CARD18P57730 90 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 ZFP82Q8N141 532 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 GJC3Q8NFK1 279 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 OR10R2Q8NGX6 335 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 NABP1Q96AH0 204 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
LRFN1-201ENST00000248668 SEC22AQ96IW7 307 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 CCDC187A0A096LP49 1063 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 FAM25EA8MYX2 175 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 SULT1C2O00338 296 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 CD37P11049 281 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 CBR1P16152 277 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 NFYAP23511 347 aaPredicted RBP13.84□□□□□ -0.19
LRFN1-201ENST00000248668 CD96P40200 585 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms