RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 BPIFCQ8NFQ6 507 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 RBM24Q9BX46 236 aaKnown RBP22.47■■□□□ 1.19
RAB40C-201ENST00000248139 IGLV3-32A0A0A0MS00 114 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 KISS1Q15726 138 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 UBE2V2Q15819 145 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 MOB3CQ70IA8 216 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 WNT2BQ93097 391 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 ZNF160Q9HCG1 818 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 A0A0B4J2A0 478 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 TOX3O15405 576 aaPredicted RBP22.46■■□□□ 1.19
RAB40C-201ENST00000248139 CRHP06850 196 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 CHRM2P08172 466 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 GLRA1P23415 457 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 HIST3H3Q16695 136 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 RAET1LQ5VY80 246 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 SHPKQ9UHJ6 478 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 HLA-GP17693 338 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 AMY2BP19961 511 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 MPZP25189 248 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 PSMB6P28072 239 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 SNTB1Q13884 538 aaKnown RBP22.46■■□□□ 1.19
RAB40C-201ENST00000248139 ZNF345Q14585 488 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 CLEC18BQ6UXF7 455 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 TMEM200AQ86VY9 491 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 OR1S2Q8NGQ3 325 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 ELP5Q8TE02 316 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 RNF126Q9BV68 326 aa22.46■■□□□ 1.19
RAB40C-201ENST00000248139 CNR1P21554 472 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 PPIAP62937 165 aaKnown RBP22.45■■□□□ 1.19
RAB40C-201ENST00000248139 ZNF273Q14593 569 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 TFAP2EQ6VUC0 442 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 NAXEQ8NCW5 288 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 OR13G1Q8NGZ3 307 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 MOB1AQ9H8S9 216 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 ASF1BQ9NVP2 202 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 FRYQ5TBA9 3013 aa22.45■■□□□ 1.19
RAB40C-201ENST00000248139 MSGN1A6NI15 193 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 PCOLCEQ15113 449 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 RSPO1Q2MKA7 263 aaPredicted RBP22.45■■□□□ 1.18
RAB40C-201ENST00000248139 PGAP1Q75T13 922 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 DOK3Q7L591 496 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 GALNTL5Q7Z4T8 443 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 FADS6Q8N9I5 356 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 GPR132Q9UNW8 380 aa22.45■■□□□ 1.18
RAB40C-201ENST00000248139 DBX1A6NMT0 343 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 MFNGO00587 321 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 PLATP00750 562 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 PNLIPP16233 465 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 BLVRBP30043 206 aaPredicted RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 SUPT4H1P63272 117 aaKnown RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 ANKRD55Q3KP44 614 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 MRPL14Q6P1L8 145 aaKnown RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 SAP25Q8TEE9 199 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 OR10A2Q9H208 303 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 PISDQ9UG56 409 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 ZNF205O95201 554 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 CSNK1A1P48729 337 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 HLA-BQ31612 363 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 OR5H2Q8NGV7 314 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 LHFPL5Q8TAF8 219 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 ZNF581Q9P0T4 197 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 FBLN5Q9UBX5 448 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 PCDHB10Q9UN67 800 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 FCGR2AP12318 317 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 CCL4P13236 92 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 FOXRED2Q8IWF2 684 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 ZSCAN4Q8NAM6 433 aaPredicted RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 OR5AP2Q8NGF4 316 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 OR52H1Q8NGJ2 320 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 LRRC46Q96FV0 321 aa22.44■■□□□ 1.18
RAB40C-201ENST00000248139 RTBDNQ9BSG5 229 aaPredicted RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 HDHD3Q9BSH5 251 aaPredicted RBP22.44■■□□□ 1.18
RAB40C-201ENST00000248139 IGKV1D-8A0A087WSZ0 117 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 GSTP1P09211 210 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 PTGFRP43088 359 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 SNU13P55769 128 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 CSNK2A1P68400 391 aaPredicted RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 ENDOGQ14249 297 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 PAN3Q58A45 887 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 TMEM128Q5BJH2 165 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 LYSMD4Q5XG99 296 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 CSNK2A3Q8NEV1 391 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 OR5AC2Q9NZP5 309 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 C19orf25Q9UFG5 118 aaPredicted RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 PTRH2Q9Y3E5 179 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 KNG1P01042 644 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 GP1BAP07359 652 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 EIF4E3Q8N5X7 224 aaKnown RBP22.43■■□□□ 1.18
RAB40C-201ENST00000248139 ADPRHL1Q8NDY3 354 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 OR56B1Q8NGI3 324 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 OR10C1Q96KK4 312 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 HDGFL3Q9Y3E1 203 aa22.43■■□□□ 1.18
RAB40C-201ENST00000248139 FAM74A7A6NL05 159 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 OR3A2P47893 321 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 SLC35A1P78382 337 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 FAM74A3Q4VXF1 159 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 AADACL3Q5VUY0 350 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 OR51F2Q8NH61 342 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 OR2AE1Q8NHA4 323 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 PAQR8Q8TEZ7 354 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms