RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GP6Q9HCN6 339 aa20.3■□□□□ 0.84
MSX2-201ENST00000239243 RAB3DO95716 219 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 MPIG6BO95866 241 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 PTGFRP43088 359 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 HGFACQ04756 655 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 SRSF6Q13247 344 aaKnown RBP20.29■□□□□ 0.84
MSX2-201ENST00000239243 PABPC1L2AQ5JQF8 200 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 BEST4Q8NFU0 473 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 OR11H7Q8NGC8 314 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 FGFBP3Q8TAT2 258 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 BEX1Q9HBH7 125 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 ZNF222Q9UK12 451 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 ZNF736B4DX44 427 aaPredicted RBP20.29■□□□□ 0.84
MSX2-201ENST00000239243 SULT1A3P0DMM9 295 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 SULT1A4P0DMN0 295 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 FAPQ12884 760 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 C3AR1Q16581 482 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 PLXDC2Q6UX71 529 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 RNF144BQ7Z419 303 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 ZNF100Q8IYN0 542 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 OR56B1Q8NGI3 324 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 OR4D10Q8NGI6 311 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 OR51S1Q8NGJ8 323 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 S100A13Q99584 98 aa20.29■□□□□ 0.84
MSX2-201ENST00000239243 FAM172BPA6NC97 362 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 XRCC2O43543 280 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 NAT2P11245 290 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 FCGR2AP12318 317 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 NOVA1P51513 510 aaKnown RBP20.28■□□□□ 0.84
MSX2-201ENST00000239243 CNN3Q15417 329 aaKnown RBP20.28■□□□□ 0.84
MSX2-201ENST00000239243 OR2AE1Q8NHA4 323 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 PRDM14Q9GZV8 571 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 KLK13Q9UKR3 277 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 ZNF175Q9Y473 711 aa20.28■□□□□ 0.84
MSX2-201ENST00000239243 SNRPGP15A8MWD9 76 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 CRTAPO75718 401 aaPredicted RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 CD74P04233 296 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 GSTP1P09211 210 aaKnown RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 MEF2DQ14814 521 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 RNFT1Q5M7Z0 435 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 FJX1Q86VR8 437 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 TMEM104Q8NE00 496 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 SELENOIQ9C0D9 397 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 NPDC1Q9NQX5 325 aaPredicted RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 SPRR3Q9UBC9 169 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 ING4Q9UNL4 249 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 ZNF891A8MT65 544 aaPredicted RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 CREBL2O60519 120 aaPredicted RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 COX5BP10606 129 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 PRKACBP22694 351 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 CDK10Q15131 360 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 TRAPPC6BQ86SZ2 158 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 NPRL2Q8WTW4 380 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 DVL3Q92997 716 aaPredicted RBP20.27■□□□□ 0.84
MSX2-201ENST00000239243 CMBLQ96DG6 245 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 HYLS1Q96M11 299 aa20.27■□□□□ 0.84
MSX2-201ENST00000239243 WIPF3A6NGB9 483 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 SLC22A20A6NK97 555 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 HPXP02790 462 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
MSX2-201ENST00000239243 STEAP2Q8NFT2 490 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 TNFAIP8L1Q8WVP5 186 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 RAB3CQ96E17 227 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 SLC25A21Q9BQT8 299 aaPredicted RBP20.26■□□□□ 0.83
MSX2-201ENST00000239243 SCP2D1Q9UJQ7 156 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 ELF5Q9UKW6 265 aaPredicted RBP20.26■□□□□ 0.83
MSX2-201ENST00000239243 ZNF407Q9C0G0 2248 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 TRAV17A0A0B4J275 112 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 PYCARD-AS1I3L0S3 204 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 SDHBP21912 280 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 ACKR3P25106 362 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 RAD52P43351 418 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 SLC22A6Q4U2R8 563 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 NICN1Q9BSH3 213 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 C1QTNF5Q9BXJ0 243 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 PTTG3PQ9NZH4 202 aa20.26■□□□□ 0.83
MSX2-201ENST00000239243 MEIKINA0A087WXM9 373 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 GNB3P16520 340 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 WT1P19544 449 aaPredicted RBP20.25■□□□□ 0.83
MSX2-201ENST00000239243 ANXA7P20073 488 aaKnown RBP20.25■□□□□ 0.83
MSX2-201ENST00000239243 TNK1Q13470 666 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 RTP5Q14D33 572 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 RANBP3Q9H6Z4 567 aaPredicted RBP20.25■□□□□ 0.83
MSX2-201ENST00000239243 IFT46Q9NQC8 304 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 CSAG2Q9Y5P2 127 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 TM4SF5O14894 197 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 IGHG3P01860 377 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 AMY2AP04746 511 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 ARR3P36575 388 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 RPS27AP62979 156 aaKnown RBP20.25■□□□□ 0.83
MSX2-201ENST00000239243 PNLIPRP3Q17RR3 467 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 CLVS2Q5SYC1 327 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 CRIP3Q6Q6R5 217 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 DPPA2Q7Z7J5 298 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 CPEB3Q8NE35 698 aaKnown RBP20.25■□□□□ 0.83
MSX2-201ENST00000239243 ZFAND1Q8TCF1 268 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 PIGTQ969N2 578 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 TECTBQ96PL2 329 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 BANF2Q9H503 90 aa20.25■□□□□ 0.83
MSX2-201ENST00000239243 GPR173Q9NS66 373 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms