RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CRNNQ9UBG3 495 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 TRDV1A0A1B0GX56 115 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 A6NNC1 897 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF732B4DXR9 585 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ADRA2AP08913 450 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ALDH3B1P43353 468 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 SNU13P55769 128 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ERVS71-1P61550 626 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 GNG3P63215 75 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 RAB11BQ15907 218 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 DMKNQ6E0U4 476 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR5D18Q8NGL1 313 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HEATR1Q9H583 2144 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 DAPK2Q9UIK4 370 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 POLDIP2Q9Y2S7 368 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 PKDREJQ9NTG1 2253 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 MYO18BQ8IUG5 2567 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 FUT6P51993 359 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HIST1H3AP68431 136 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 DMRTC1Q5HYR2 192 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HIST2H3PS2Q5TEC6 136 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 XAF1Q6GPH4 301 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HIST2H3AQ71DI3 136 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 CROCCP3Q8IVE0 287 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 C10orf35Q96D05 121 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 CCL19Q99731 98 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 CST11Q9H112 138 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 SAP30LQ9HAJ7 183 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 NPAP1Q9NZP6 1156 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 PRRC2CQ9Y520 2896 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 METTL21EPA6NDL7 271 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 CDC14BO60729 498 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 JUNBP17275 347 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 SRMP19623 302 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 GPM6AP51674 278 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR8B8Q15620 311 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HFEQ30201 348 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 LHFPL2Q6ZUX7 228 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR10AD1Q8NGE0 317 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ITFG2Q969R8 447 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 DIRC2Q96SL1 478 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 CXXC4Q9H2H0 198 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 FN3KRPQ9HA64 309 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 NDUFB11Q9NX14 153 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 PLEKHB1Q9UF11 243 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 V9GY05 133 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 ATF1P18846 271 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HAAOP46952 286 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 IRF3Q14653 427 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 NKAIN3Q8N8D7 197 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 MRPL24Q96A35 216 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HAVCR1Q96D42 359 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 SORCS2Q96PQ0 1159 aa9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 URM1Q9BTM9 101 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 MRPS7Q9Y2R9 242 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-201ENST00000237289 HIVEP3Q5T1R4 2406 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 NXPH2O95156 264 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 KIR3DL2P43630 455 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 TMBIM6P55061 237 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 ACSM1Q08AH1 577 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 DOC2BQ14184 412 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 HAGHLQ6PII5 290 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 PAQR4Q8N4S7 273 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR8G5Q8NG78 346 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 CCL17Q92583 94 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 FRYQ5TBA9 3013 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF503-AS2A6NEH8 195 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 SULT1B1O43704 296 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 CALCRP30988 508 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 SLC22A6Q4U2R8 563 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 SPSB1Q96BD6 273 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 METTL9Q9H1A3 318 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 G6PC2Q9NQR9 355 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 TXNL4BQ9NX01 149 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 RHBDD3Q9Y3P4 386 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 UCHL1P09936 223 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 DNASE1P24855 282 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 CCKARP32238 428 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 MNDAP41218 407 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 WNT5AP41221 380 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 PLPP7Q8NBV4 271 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 SPOCK3Q9BQ16 436 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 PNRC2Q9NPJ4 139 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZDHHC8Q9ULC8 765 aa9.58□□□□□ -0.88
TNFAIP3-201ENST00000237289 CADP27708 2225 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR5B21A6NL26 309 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 H3BUI4 141 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 LALBAP00709 142 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 AZGP1P25311 298 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 CCL8P80075 99 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 FAM3AP98173 230 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 HNRNPA0Q13151 305 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 GPR176Q14439 515 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 HES5Q5TA89 166 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms