RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 M0R135 149 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 MFNGO00587 321 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 ARPC5O15511 151 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 MTRF1O75570 445 aaKnown RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CRYGSP22914 178 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PTGFRP43088 359 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 RPS27AP62979 156 aaKnown RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 FGL1Q08830 312 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 GFOD2Q3B7J2 385 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 ACTBL2Q562R1 376 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 SLC16A14Q7RTX9 510 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 LYG2Q86SG7 212 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 YRDCQ86U90 279 aaKnown RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 GPR137CQ8N3F9 429 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 LRRC18Q8N456 261 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 STEAP2Q8NFT2 490 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 OR52H1Q8NGJ2 320 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 MITD1Q8WV92 249 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 FBXO17Q96EF6 278 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 ZNF799Q96GE5 643 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 TAAR9Q96RI9 348 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 GPER1Q99527 375 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 DDA1Q9BW61 102 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 STRADBQ9C0K7 418 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CST11Q9H112 138 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PCDHGA1Q9Y5H4 931 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 MED12Q93074 2177 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 B3GALNT1O75752 331 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CST2P09228 141 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 RRASP10301 218 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PPP3CBP16298 524 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CD34P28906 385 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 AVPR2P30518 371 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CBX5P45973 191 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 UBE2V2Q15819 145 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 ARRDC1Q8N5I2 433 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 OR4K15Q8NH41 348 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 OR14L1PQ8NHC6 308 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CPT1CQ8TCG5 803 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PSMF1Q92530 271 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 ZNF837Q96EG3 531 aaPredicted RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PLEK2Q9NYT0 353 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 PHF3Q92576 2039 aaKnown RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 C9orf170A2RU37 121 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 OR2AT4A6NND4 320 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 HLA-AP01891 365 aaKnown RBP14.17□□□□□ -0.14
UBE3D-201ENST00000237186 IFNA6P05013 189 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 CSN2P05814 226 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 NTF4P34130 210 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 SLC6A9P48067 706 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 RAB35Q15286 201 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 ABLIM2Q6H8Q1 611 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 DRAM2Q6UX65 266 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 RAB11FIP2Q7L804 512 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 DTX1Q86Y01 620 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 OR2V1Q8NHB1 315 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 HAS2Q92819 552 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 TM2D1Q9BX74 207 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 OR10A2Q9H208 303 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 BANF2Q9H503 90 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 P4HTMQ9NXG6 502 aa14.17□□□□□ -0.14
UBE3D-201ENST00000237186 FXYD6-FXYD2A0A087WZ82 144 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 A0A1W2PP11 408 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 EFSO43281 561 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 RP2O75695 350 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 CRTAPO75718 401 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-201ENST00000237186 RFPL3SP0C7P2 107 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 SLC25A4P12235 298 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 AGTR1P30556 359 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 CYB561P49447 251 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 AP2S1P53680 142 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-201ENST00000237186 SORDQ00796 357 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 KRTAP27-1Q3LI81 207 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 RIPPLY2Q5TAB7 128 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 LIN54Q6MZP7 749 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 C17orf107Q6ZR85 190 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 RTN4RL2Q86UN3 420 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 OR6K3Q8NGY3 331 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 TERB2Q8NHR7 220 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 SGK3Q96BR1 496 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 LIN37Q96GY3 246 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-201ENST00000237186 FXYD6Q9H0Q3 95 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 TMEM38BQ9NVV0 291 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 FRYLO94915 3013 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 SHOXO15266 292 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 SYNGR3O43761 229 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 CA11O75493 328 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 RAD51DO75771 328 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 CNR1P21554 472 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 PPP1R1AQ13522 171 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 ARL6IP1Q15041 203 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 C1QL2Q7Z5L3 287 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 ESX1Q8N693 406 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 FBXW5Q969U6 566 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 ARHGAP5-AS1Q96IT6 56 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 ARL6Q9H0F7 186 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 FN3KRPQ9HA64 309 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 DEPPQ9NTK1 212 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms