RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 SPINT3P49223 89 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 PNLIPRP1P54315 467 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 CDH12P55289 794 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 ST8SIA6P61647 398 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 ST3GAL3Q11203 375 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 NSDHLQ15738 373 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 ZNF770Q6IQ21 691 aaPredicted RBP5.09□□□□□ -1.59
RFX4-201ENST00000229387 PODNL1Q6PEZ8 512 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 FRRS1Q6ZNA5 592 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 TTLL10Q6ZVT0 673 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 MTURNQ8N3F0 131 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 ACOT4Q8N9L9 421 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 OR51D1Q8NGF3 324 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 TMED6Q8WW62 240 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 FCAMRQ8WWV6 532 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 IRF7Q92985 503 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 TMEM186Q96B77 213 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 PRAP1Q96NZ9 151 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 IL4I1Q96RQ9 567 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 LYSMD1Q96S90 227 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 SLC17A9Q9BYT1 436 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 AUNIPQ9H7T9 357 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 TM7SF3Q9NS93 570 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 TMEM242Q9NWH2 141 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 FKBP11Q9NYL4 201 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 SH2B3Q9UQQ2 575 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 FARSAQ9Y285 508 aaKnown RBP5.09□□□□□ -1.59
RFX4-201ENST00000229387 CFAP54Q96N23 3096 aa5.09□□□□□ -1.59
RFX4-201ENST00000229387 PTPRDP23468 1912 aa5.09□□□□□ -1.6
RFX4-201ENST00000229387 VSTM2BA6NLU5 285 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 DCNP07585 359 aaKnown RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 MMP7P09237 267 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 ATP1B2P14415 290 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 PGAM2P15259 253 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CEBPBP17676 345 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 TIMP3P35625 211 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 LPAR6P43657 344 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SPIBQ01892 262 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PLEKHS1Q5SXH7 462 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 OR2G6Q5TZ20 316 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 UNQ6126/PRO20091Q6UXV3 157 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 TEX43Q6ZNM6 134 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 MTSS1LQ765P7 747 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 OLIG3Q7RTU3 272 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 VASH2Q86V25 355 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 KDM8Q8N371 416 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CCDC71LQ8N9Z2 235 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC38A9Q8NBW4 561 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 ZNF689Q96CS4 500 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 HDAC8Q9BY41 377 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC35B3Q9H1N7 401 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SEMA4GQ9NTN9 838 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPP1R3CQ9UQK1 317 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC22A13Q9Y226 551 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 HIF3AQ9Y2N7 669 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 OARD1Q9Y530 152 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPIAL4EA0A075B759 164 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPIAL4CA0A0B4J2A2 164 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 ANKUB1A6NFN9 424 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 A6NIN4 97 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPIAL4DF5H284 164 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 H0Y8X5 98 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 AGPAT2O15120 278 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 KLK8O60259 260 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CLEC3BP05452 202 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 LIMS3P0CW19 117 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 LIMS4P0CW20 117 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPIAL4FP0DN26 164 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PPIAL4GP0DN37 164 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CSNK2A2P19784 350 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 GLIPR1P48060 266 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 PTH2RP49190 550 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 RPS16P62249 146 aaKnown RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 RPS13P62277 151 aaKnown RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 EBPQ15125 230 aaKnown RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 CRB2Q5IJ48 1285 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 TMEM225Q6GV28 225 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLCO4C1Q6ZQN7 724 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 ARHGEF39Q8N4T4 335 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 STPG4Q8N801 248 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 AMER3Q8N944 861 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 ADIPOR1Q96A54 375 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 RSPRY1Q96DX4 576 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC41A2Q96JW4 573 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 ZNF552Q9H707 407 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC17A5Q9NRA2 495 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SLC23A2Q9UGH3 650 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CCL27Q9Y4X3 112 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CDHR4A6H8M9 788 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 G3V4G9 280 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 IL3P08700 152 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 CSF1P09603 554 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SOAT1P35610 550 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 OPRD1P41143 372 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 AQP2P41181 271 aa5.08□□□□□ -1.6
RFX4-201ENST00000229387 SUMO3P55854 103 aaPredicted RBP5.08□□□□□ -1.6
RFX4-201ENST00000229387 SELENOWP63302 87 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms