RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CSNK2A3Q8NEV1 391 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 OR1M1Q8NGA1 313 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 OR8B12Q8NGG6 310 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 FAM216AQ8WUB2 273 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 LRRC29Q8WV35 223 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
GPN3-201ENST00000228827 DUX5Q96PT3 197 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 YIPF3Q9GZM5 350 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
GPN3-201ENST00000228827 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
GPN3-201ENST00000228827 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 KIR2DS1A0A191URI9 304 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 G3V2T6 193 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ATP5HO75947 161 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ACKR3P25106 362 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 FASP25445 335 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 EPHA2P29317 976 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 ESRRGP62508 458 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 LCN1P1Q5VSP4 162 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 GCDHQ92947 438 aaPredicted RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 MICU1Q9BPX6 476 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 RGCCQ9H4X1 137 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 SMURF1Q9HCE7 757 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 COPS3Q9UNS2 423 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ANK2Q01484 3957 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ANXA2P2A6NMY6 339 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 CDIPTO14735 213 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 GMFBP60983 142 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 FGF12P61328 243 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 UBA52P62987 128 aaKnown RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 PRDX4Q13162 271 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 WDR82Q6UXN9 313 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 KCTD8Q6ZWB6 473 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 TCEANCQ8N8B7 351 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 PIGCQ92535 297 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 UPRTQ96BW1 309 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ITPKCQ96DU7 683 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 SEH1LQ96EE3 360 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 CNN2Q99439 309 aaKnown RBP11.83□□□□□ -0.52
GPN3-201ENST00000228827 PRRG3Q9BZD7 231 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 SEMA6AQ9H2E6 1030 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 NIPAL2Q9H841 368 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.52
GPN3-201ENST00000228827 ARHGAP32A7KAX9 2087 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 TMEM269A0A1B0GVZ9 245 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
GPN3-201ENST00000228827 ENSAO43768 121 aaKnown RBP11.82□□□□□ -0.52
GPN3-201ENST00000228827 LHBP01229 141 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 NPY4RP50391 375 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 IL5RAQ01344 420 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 BAMBIQ13145 260 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 SLX4IPQ5VYV7 408 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 KDM4DQ6B0I6 523 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 MEPCEQ7L2J0 689 aaKnown RBP11.82□□□□□ -0.52
GPN3-201ENST00000228827 COMMD2Q86X83 199 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 ZDHHC13Q8IUH4 622 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 FTMTQ8N4E7 242 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 FAM81AQ8TBF8 368 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
GPN3-201ENST00000228827 IL4I1Q96RQ9 567 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 PCGF1Q9BSM1 259 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 RTL8AQ9BWD3 113 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 MROQ9BYG7 248 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 FAM206AQ9NX38 181 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 H2AFY2Q9P0M6 372 aaPredicted RBP11.82□□□□□ -0.52
GPN3-201ENST00000228827 IKZF2Q9UKS7 526 aa11.82□□□□□ -0.52
GPN3-201ENST00000228827 A0A1B0GW55 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DNAJC9-AS1A6NH13 148 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DVL1O14640 695 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 TMPRSS2O15393 492 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 MAGEB4O15481 346 aaPredicted RBP11.81□□□□□ -0.52
GPN3-201ENST00000228827 NDUFA2O43678 99 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 CIB2O75838 187 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L2P0CJ85 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L3P0CJ86 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L4P0CJ87 422 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L5P0CJ88 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L6P0CJ89 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L7P0CJ90 424 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 SNCBQ16143 134 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 MICBQ29980 383 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 TEX36Q5VZQ5 186 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 CD276Q5ZPR3 534 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DUX4L9Q6RFH8 374 aaPredicted RBP11.81□□□□□ -0.52
GPN3-201ENST00000228827 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 DOK3Q7L591 496 aa11.81□□□□□ -0.52
GPN3-201ENST00000228827 ZDHHC23Q8IYP9 409 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms