RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DHRS13Q6UX07 377 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A6P0DMU7 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A5P0DMU8 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A7P0DMV0 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A8P0DMV1 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A9P0DMV2 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A2Q5DJT8 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A1Q5HYN5 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 WDR38Q5JTN6 314 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 ZNF626Q68DY1 528 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 FAM185AQ8N0U4 392 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CISD2Q8N5K1 135 aaKnown RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 CT45A3Q8NHU0 189 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 C4orf45Q96LM5 186 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 PPP1R3CQ9UQK1 317 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 SERPINE3A8MV23 424 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 LINC01387J3KSC0 135 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 ZNF354AO60765 605 aaPredicted RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 SPNP16150 400 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 ACKR3P25106 362 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 MPLP40238 635 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 DMWDQ09019 674 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 LINC00303Q3SY05 128 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 C16orf47Q6ZP98 133 aaPredicted RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 CARFQ8N187 725 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 OSR2Q8N2R0 312 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CPEB3Q8NE35 698 aaKnown RBP10.33□□□□□ -0.76
NOD1-201ENST00000222823 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 FBXL4Q9UKA2 621 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 FOXJ3Q9UPW0 622 aa10.33□□□□□ -0.76
NOD1-201ENST00000222823 CDC42EP2O14613 210 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 OR8U8P0C7N1 319 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 HLA-DOBP13765 273 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 SSBP1Q04837 148 aaKnown RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GLCCI1Q86VQ1 547 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 CATSPERDQ86XM0 798 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 ATP23Q9Y6H3 246 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 K7EQS6 105 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 LRP3O75074 770 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 ALX3O95076 343 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 EPHA8P29322 1005 aaPredicted RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 GABRA4P48169 554 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 NOVA1P51513 510 aaKnown RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 RAB1AP62820 205 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GUCA2AQ02747 115 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 EIF3IQ13347 325 aaKnown RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 DEGS2Q6QHC5 323 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 TRILQ7L0X0 811 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GCNT2Q8N0V5 402 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 DTWD2Q8NBA8 298 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 APOBEC3DQ96AK3 386 aaPredicted RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 FAM173AQ9BQD7 235 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 SMCO4Q9NRQ5 59 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 RAB19A4D1S5 217 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 LGALS8O00214 317 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GCM2O75603 506 aaPredicted RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 CNIH1O95406 144 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 HLA-HP01893 362 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 DEFA4P12838 97 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GALP22466 123 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 RPL12P30050 165 aaKnown RBP10.32□□□□□ -0.76
NOD1-201ENST00000222823 THBS4P35443 961 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 FUT6P51993 359 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 TOR2AQ5JU69 321 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 OR1F12Q8NHA8 337 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GPX8Q8TED1 209 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 HIF1ANQ9NWT6 349 aa10.32□□□□□ -0.76
NOD1-201ENST00000222823 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 ZNF724A8MTY0 619 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 EPPINO95925 133 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 MT-ND4LP03901 98 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 TAGLN2P37802 199 aaKnown RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 CDKN2AP42771 156 aaKnown RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 PIGPP57054 158 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ADIRFQ15847 76 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ZNF141Q15928 474 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ACER2Q5QJU3 275 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 Q6ZRG5 221 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 SSX9Q7RTT3 188 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 BAP18Q8IXM2 172 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 FBXL14Q8N1E6 418 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 PPP1R1CQ8WVI7 109 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
NOD1-201ENST00000222823 TIMD4Q96H15 378 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 PLEKHA2Q9HB19 425 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 DLL4Q9NR61 685 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 PLA2G3Q9NZ20 509 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 ANKRD36A6QL64 1941 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 TRGV5A0A0B4J1U4 118 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 RER1O15258 196 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
NOD1-201ENST00000222823 CD80P33681 288 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms