RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZNF260Q3ZCT1 412 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 TMEM128Q5BJH2 165 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 ADAD2Q8NCV1 583 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 TGIF2Q9GZN2 237 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 FAM206AQ9NX38 181 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 GLS2Q9UI32 602 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 PCDHGA1Q9Y5H4 931 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 LHFPL6Q9Y693 200 aa13.24□□□□□ -0.29
UBE2D4-201ENST00000222402 BCL2L11O43521 198 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 B3GALNT1O75752 331 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 IAH1Q2TAA2 248 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 RPS4Y2Q8TD47 263 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 RHBDD1Q8TEB9 315 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ASB13Q8WXK3 278 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ALKBH3Q96Q83 286 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 UCN2Q96RP3 112 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 PCDH15Q96QU1 1955 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 CCL4P13236 92 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 TCN2P20062 427 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ZP3P21754 424 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ECH1Q13011 328 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 OR5M9Q8NGP3 310 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 RPS10-NUDT3A0A1W2PQS6 291 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 WRBO00258 174 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 SHOXO15266 292 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 RAMP1O60894 148 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 CNN3Q15417 329 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 FAM76BQ5HYJ3 339 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 MOB3CQ70IA8 216 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ESX1Q8N693 406 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 OR2AE1Q8NHA4 323 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 SOX7Q9BT81 388 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 NELFAQ9H3P2 528 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 ABI3Q9P2A4 366 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 PISDQ9UG56 409 aa13.23□□□□□ -0.29
UBE2D4-201ENST00000222402 FAM221AA4D161 298 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 CXCL13O43927 109 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 OR7C1O76099 320 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ADH6P28332 368 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PTGFRP43088 359 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 SHBQ15464 509 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 NHLRC3Q5JS37 347 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PLCXD3Q63HM9 321 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF574Q6ZN55 896 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC25A42Q86VD7 318 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ARRDC1Q8N5I2 433 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF441Q8N8Z8 693 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 H7C2Y5 167 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 KCNAB3O43448 404 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ADAP1O75689 374 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 CCL3P10147 92 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 EFNA3P52797 238 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 MS4A7Q9GZW8 240 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PCDHB16Q9NRJ7 776 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 THADAQ6YHU6 1953 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PGA4P0DJD7 388 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PGA3P0DJD8 388 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 B4GALT1P15291 398 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 TUSC1Q2TAM9 212 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 OR13C8Q8NGS7 320 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 PTX4Q96A99 478 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 LRRC46Q96FV0 321 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 SPSB2Q99619 263 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF2Q9BSG1 426 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ARPC4-TTLL3A0A0A6YYG9 625 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 DBHP09172 617 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 MICBQ29980 383 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 TMEM164Q5U3C3 297 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF660Q6AZW8 331 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 OR2W3Q7Z3T1 314 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF565Q8N9K5 539 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ROBO4Q8WZ75 1007 aa13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF385AQ96PM9 386 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-201ENST00000222402 TTLL8A6PVC2 850 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 TRAF3IP2O43734 574 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 GDF9O60383 454 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 DUS4LO95620 317 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 PATE4P0C8F1 98 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 PAN3Q58A45 887 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 AQP7P3A6NL99 342 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 CER1O95813 267 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 IGFBP3P17936 291 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 GLRA1P23415 457 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms