RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SMAD9O15198 467 aaKnown RBP19.55■□□□□ 0.72
CCDC9-201ENST00000221922 CSNK2A1P68400 391 aaPredicted RBP19.55■□□□□ 0.72
CCDC9-201ENST00000221922 C6orf15Q6UXA7 325 aaPredicted RBP19.55■□□□□ 0.72
CCDC9-201ENST00000221922 ABHD12BQ7Z5M8 362 aaPredicted RBP19.55■□□□□ 0.72
CCDC9-201ENST00000221922 COMMD2Q86X83 199 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 OR8B12Q8NGG6 310 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 IFT46Q9NQC8 304 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 KCNK7Q9Y2U2 307 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 LNP1A1A4G5 178 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 RER1O15258 196 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 EFSO43281 561 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 SSX5O60225 188 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 ICAM2P13598 275 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 GNB3P16520 340 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 KLK2P20151 261 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 CASRP41180 1078 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 CX3CR1P49238 355 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 LUMP51884 338 aaPredicted RBP19.55■□□□□ 0.72
CCDC9-201ENST00000221922 CHAF1BQ13112 559 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 FAM74A1Q5RGS3 127 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 GNRHR2Q96P88 292 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 C12orf4Q9NQ89 552 aa19.55■□□□□ 0.72
CCDC9-201ENST00000221922 LOC100509620A0A075B734 347 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 DUS4LO95620 317 aaKnown RBP19.54■□□□□ 0.72
CCDC9-201ENST00000221922 CCL1P22362 96 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF93P35789 620 aaPredicted RBP19.54■□□□□ 0.72
CCDC9-201ENST00000221922 DLSTP36957 453 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 STARP49675 285 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 LRRC37A5PQ49AS3 106 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 C10orf128Q5T292 105 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 SGCZQ96LD1 299 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 SELENOIQ9C0D9 397 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 GPR84Q9NQS5 396 aa19.54■□□□□ 0.72
CCDC9-201ENST00000221922 ZIC3O60481 467 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CHRM2P08172 466 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CTRB1P17538 263 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 MSR1P21757 451 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF133P52736 654 aaPredicted RBP19.53■□□□□ 0.72
CCDC9-201ENST00000221922 AWAT2Q6E213 333 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CTRB2Q6GPI1 263 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 DOK3Q7L591 496 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 RAB11FIP2Q7L804 512 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ANGPTL5Q86XS5 388 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF283Q8N7M2 679 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CT55Q8WUE5 264 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 TMEM54Q969K7 222 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 TMEM41AQ96HV5 264 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF75AQ96N20 296 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 TAAR9Q96RI9 348 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 DDA1Q9BW61 102 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 FN3KRPQ9HA64 309 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 KIAA1549Q9HCM3 1950 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 MED12Q93074 2177 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 DBX1A6NMT0 343 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 GJE1A6NN92 205 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 NPIPA2E9PIF3 369 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 NPIPA3F8WFD2 350 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CBR3O75828 277 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CNR1P21554 472 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 CTSSP25774 331 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 AVPR2P30518 371 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 PLA2G2CQ5R387 149 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 OR2W3Q7Z3T1 314 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 HOGA1Q86XE5 327 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ADAD2Q8NCV1 583 aaKnown RBP19.53■□□□□ 0.72
CCDC9-201ENST00000221922 JSRP1Q96MG2 331 aaPredicted RBP19.53■□□□□ 0.72
CCDC9-201ENST00000221922 NELFAQ9H3P2 528 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 ANAPC10Q9UM13 185 aa19.53■□□□□ 0.72
CCDC9-201ENST00000221922 TCN2P20062 427 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 OTX2P32243 289 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 RPS18P62269 152 aaKnown RBP19.52■□□□□ 0.72
CCDC9-201ENST00000221922 SGCAQ16586 387 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 TIPARPQ7Z3E1 657 aaKnown RBP19.52■□□□□ 0.72
CCDC9-201ENST00000221922 OR52H1Q8NGJ2 320 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 THAP6Q8TBB0 222 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 PIGQQ9BRB3 760 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF416Q9BWM5 594 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 ZNF471Q9BX82 626 aaPredicted RBP19.52■□□□□ 0.72
CCDC9-201ENST00000221922 LPAR5Q9H1C0 372 aa19.52■□□□□ 0.72
CCDC9-201ENST00000221922 IFNA6P05013 189 aa19.52■□□□□ 0.71
CCDC9-201ENST00000221922 NAT1P18440 290 aa19.52■□□□□ 0.71
CCDC9-201ENST00000221922 RAC1P63000 192 aa19.52■□□□□ 0.71
CCDC9-201ENST00000221922 SSPNQ14714 243 aa19.52■□□□□ 0.71
CCDC9-201ENST00000221922 PAN3Q58A45 887 aaKnown RBP19.52■□□□□ 0.71
CCDC9-201ENST00000221922 FOXL2NBQ6ZUU3 175 aa19.52■□□□□ 0.71
CCDC9-201ENST00000221922 WDPCPO95876 746 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 SLC2A1P11166 492 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 TAS2R31P59538 309 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 EIF3IQ13347 325 aaKnown RBP19.51■□□□□ 0.71
CCDC9-201ENST00000221922 FAM189A2Q15884 450 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 ZNF468Q5VIY5 522 aaPredicted RBP19.51■□□□□ 0.71
CCDC9-201ENST00000221922 FAM57BQ71RH2 274 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 OR5AS1Q8N127 324 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 GJC3Q8NFK1 279 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 OR9K2Q8NGE7 335 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 FBXW5Q969U6 566 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 INTS12Q96CB8 462 aaKnown RBP19.51■□□□□ 0.71
CCDC9-201ENST00000221922 C1orf147Q96MC9 270 aaPredicted RBP19.51■□□□□ 0.71
CCDC9-201ENST00000221922 NICN1Q9BSH3 213 aa19.51■□□□□ 0.71
CCDC9-201ENST00000221922 NCOA6Q14686 2063 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms