RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CSF3RQ99062 836 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 SEC11CQ9BY50 192 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 FBXO4Q9UKT5 387 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 TAF1P21675 1872 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 GABRA6Q16445 453 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 MARCH1Q8TCQ1 289 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 NIPSNAP1Q9BPW8 284 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 GPR61Q9BZJ8 451 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 TMEM218A2RU14 115 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 SP1P08047 785 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 PRDX1Q06830 199 aaKnown RBP13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 ABLIM2Q6H8Q1 611 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 CLDN23Q96B33 292 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 EGLN2Q96KS0 407 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 ZPBPQ9BS86 351 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 TNFRSF10CO14798 259 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 CTNSO60931 367 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 TOMM34Q15785 309 aaPredicted RBP13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 CST9Q5W186 159 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 TAAR9Q96RI9 348 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 DOK5Q9P104 306 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 GJB3O75712 270 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 KRASP01116 189 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 FURINP09958 794 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 ACP1P24666 158 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 XKR7Q5GH72 579 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 PRDM7Q9NQW5 492 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 MMP26Q9NRE1 261 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 DIMT1Q9UNQ2 313 aaKnown RBP13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC45A1Q9Y2W3 748 aa13.27□□□□□ -0.28
SPTLC2-201ENST00000216484 GCAP28676 217 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 DHODHQ02127 395 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 WDTC1Q8N5D0 677 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 OR1L1Q8NH94 360 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 Q96M85 177 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 A4GALTQ9NPC4 353 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 PRSS21Q9Y6M0 314 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 F5P12259 2224 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 RAB29O14966 203 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 C11orf91Q3C1V1 193 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 REC114Q7Z4M0 266 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 TP53INP2Q8IXH6 220 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 OR52B4Q8NGK2 314 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 ST3GAL6Q9Y274 331 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 NFAT5O94916 1531 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 RPL27P61353 136 aaKnown RBP13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 AANATQ16613 207 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM81Q6P7N7 255 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 NUDT11Q96G61 164 aa13.27□□□□□ -0.29
SPTLC2-201ENST00000216484 M0R135 149 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CLEC2LP0C7M8 214 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ZBTB25P24278 435 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CSF2RBP32927 897 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CHRNA7P36544 502 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 IGSF11Q5DX21 431 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF799Q96GE5 643 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 DDX60Q8IY21 1712 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 SERPINE3A8MV23 424 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 HOXC11O43248 304 aaPredicted RBP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF737O75373 536 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 OR1D5P58170 312 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 TIAL1Q01085 375 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF788Q6ZQV5 615 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 UBE2L6O14933 153 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 SRP14P37108 136 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 OR52N4Q8NGI2 321 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CA5BP1Q8WTZ4 195 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 USP22Q9UPT9 525 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 LY86O95711 162 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 C2orf50Q96LR7 162 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 GLIPR2Q9H4G4 154 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 NUMBLQ9Y6R0 609 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 NCOR1O75376 2440 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 LOC107984156A0A0G2JMH3 177 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 TFAP2AP05549 437 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CTSAP10619 480 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ERVS71-1P61550 626 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 CTBSQ01459 385 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 HNRNPA1L2Q32P51 320 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 GLCCI1Q86VQ1 547 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ARL17AQ8IVW1 177 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 SLAMF6Q96DU3 332 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 GPR137Q96N19 417 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 DGCR2P98153 550 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 NEURL3Q96EH8 262 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM56Q96MV1 263 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 GDE1Q9NZC3 331 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 BCL9LQ86UU0 1499 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms