RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CYHR1Q6ZMK1 362 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TMEM178AQ8NBL3 297 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CT45A3Q8NHU0 189 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 STARD4Q96DR4 205 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
VCL-201ENST00000211998 KIR3DX1Q9H7L2 352 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 FBXO34Q9NWN3 711 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 OR1A1Q9P1Q5 309 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 TMED7Q9Y3B3 224 aa9.44□□□□□ -0.9
VCL-201ENST00000211998 SLC17A2O00624 439 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ONECUT2O95948 504 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 IGHA1P01876 353 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RNF224P0DH78 156 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 CSNK1EP49674 416 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 DOK3Q7L591 496 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 OR2T10Q8NGZ9 312 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 SPPL3Q8TCT6 385 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 TRMT61AQ96FX7 289 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 OR6C1Q96RD1 312 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 SLC22A12Q96S37 553 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 TBX15Q96SF7 602 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RGPD1P0DJD0 1748 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 KIR2DS1A0A191URI9 304 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 FZD6O60353 706 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 UTS2O95399 124 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 SFT2D2O95562 160 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 CD27P26842 260 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 KIR2DS4P43632 304 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 CLDN17P56750 224 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 KIR2DS1Q14954 304 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 DUSP5Q16690 384 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 WDR74Q6RFH5 385 aaPredicted RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 OR8B4Q96RC9 309 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ATP5SQ99766 215 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RASL12Q9NYN1 266 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 GNG12Q9UBI6 72 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RALYQ9UKM9 306 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 CCL26Q9Y258 94 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 NOSIPQ9Y314 301 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 FAM221AA4D161 298 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 PPM1DO15297 605 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 PLPP2O43688 288 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 AKR7A3O95154 331 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 GPANK1O95872 356 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 CXCL2P19875 107 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 CD96P40200 585 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RPL27P61353 136 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 TIAL1Q01085 375 aaKnown RBP eCLIP9.43□□□□□ -0.9
VCL-201ENST00000211998 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 DHRS11Q6UWP2 260 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 BATF2Q8N1L9 274 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ARRDC1Q8N5I2 433 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 SLC35A4Q96G79 324 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 RBM14Q96PK6 669 aaKnown RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 LIPGQ9Y5X9 500 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 C4AP0C0L4 1744 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 DUXBA0A1W2PPF3 345 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 LINC01553A4QN01 128 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 PRR35P0CG20 571 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 GLULP15104 373 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 CRISP2P16562 243 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 FPR2P25090 351 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 EXT1Q16394 746 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ZNF468Q5VIY5 522 aaPredicted RBP9.43□□□□□ -0.9
VCL-201ENST00000211998 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 FGF21Q9NSA1 209 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 FUT9Q9Y231 359 aa9.43□□□□□ -0.9
VCL-201ENST00000211998 PLA1AQ53H76 456 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 OR4A47Q6IF82 309 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 TFAP2EQ6VUC0 442 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 NHLRC2Q8NBF2 726 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 OR4N2Q8NGD1 307 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 NTNG2Q96CW9 530 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 LYRM4Q9HD34 91 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 PPP1R3CQ9UQK1 317 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 ZNF891A8MT65 544 aaPredicted RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 UPK1AO00322 258 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 GSTZ1O43708 216 aaPredicted RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 ADPRHL1Q8NDY3 354 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 OR5AU1Q8NGC0 362 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 HMGCLL1Q8TB92 370 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 PCED1AQ9H1Q7 454 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 HSF4Q9ULV5 492 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 PRSS23O95084 383 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 GP1BAP07359 652 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 ENPP1P22413 925 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 SLC37A1P57057 533 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 TMEM33P57088 247 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 SP6Q3SY56 376 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 TMEM64Q6YI46 380 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms