RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 RAB3GAP2Q9H2M9 1393 aa7.67□□□□□ -1.18
SAMMSON-227ENST00000642114 USP54Q70EL1 1684 aa7.67□□□□□ -1.18
SAMMSON-227ENST00000642114 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
SAMMSON-227ENST00000642114 TUBGCP6Q96RT7 1819 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 ADH1AP07327 375 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 GSK3AP49840 483 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 SMC1BQ8NDV3 1235 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 RNF217Q8TC41 542 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 IP6K1Q92551 441 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 FAM117AQ9C073 453 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 PALLDQ8WX93 1383 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 PXDNLA1KZ92 1463 aa7.66□□□□□ -1.18
SAMMSON-227ENST00000642114 HSPA1AP0DMV8 641 aaKnown RBP7.65□□□□□ -1.18
SAMMSON-227ENST00000642114 HSPA1BP0DMV9 641 aaKnown RBP7.65□□□□□ -1.18
SAMMSON-227ENST00000642114 EDC4Q6P2E9 1401 aaKnown RBP7.65□□□□□ -1.18
SAMMSON-227ENST00000642114 EPS8L1Q8TE68 723 aa7.65□□□□□ -1.18
SAMMSON-227ENST00000642114 DOT1LQ8TEK3 1739 aa7.65□□□□□ -1.18
SAMMSON-227ENST00000642114 SBNO2Q9Y2G9 1366 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 PCDH11XQ9BZA7 1347 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 PCDH11YQ9BZA8 1340 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 ERVH48-1M5A8F1 160 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 SLURP2P0DP57 97 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 PTGIRP43119 386 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 ARHGAP27Q6ZUM4 889 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 HDGFL2Q7Z4V5 671 aaPredicted RBP7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
SAMMSON-227ENST00000642114 C5P01031 1676 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 RTL1A6NKG5 1358 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 MARSP56192 900 aaKnown RBP7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 HTRA3P83110 453 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 LYSMD3Q7Z3D4 306 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 NME9Q86XW9 330 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 RAPGEF4Q8WZA2 1011 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 HMX1Q9NP08 348 aaPredicted RBP7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 RGPD5Q99666 1765 aa7.63□□□□□ -1.19
SAMMSON-227ENST00000642114 MEGF6O75095 1541 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 SMG6Q86US8 1419 aaKnown RBP7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 LILRA1O75019 489 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 MMP10P09238 476 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 ADD1P35611 737 aaKnown RBP7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 C9orf131Q5VYM1 1079 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 WHAMMQ8TF30 809 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
SAMMSON-227ENST00000642114 C4BP0C0L5 1744 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 MON2Q7Z3U7 1717 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 IRS1P35568 1242 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 NLGN1Q8N2Q7 840 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 ANP32EQ9BTT0 268 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 CCDC87Q9NVE4 849 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 CD163L1Q9NR16 1453 aa7.61□□□□□ -1.19
SAMMSON-227ENST00000642114 ESPNB1AK53 854 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 TATP17735 454 aaPredicted RBP7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 HOXC9P31274 260 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 MAP3K10Q02779 954 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 MPRIPQ6WCQ1 1025 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 PRICKLE2Q7Z3G6 844 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 CYLDQ9NQC7 956 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 PRDM10Q9NQV6 1147 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 RNF181Q9P0P0 153 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 KCPQ6ZWJ8 1503 aa7.6□□□□□ -1.19
SAMMSON-227ENST00000642114 MAP3K19Q56UN5 1328 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 LOC102724428A0A0B4J2F2 783 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 A0A0G2JLW4 131 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 VEGFAP15692 232 aaPredicted RBP7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 RFC5P40937 340 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 AMPHP49418 695 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 SIK1P57059 783 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 SRSF11Q05519 484 aaKnown RBP7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 KDF1Q8NAX2 398 aaPredicted RBP7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 DCAF5Q96JK2 942 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 PIM2Q9P1W9 311 aa7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 TNRC6CQ9HCJ0 1690 aaKnown RBP7.59□□□□□ -1.19
SAMMSON-227ENST00000642114 LTN1O94822 1766 aa7.59□□□□□ -1.2
SAMMSON-227ENST00000642114 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.2
SAMMSON-227ENST00000642114 TOGARAM1Q9Y4F4 1720 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 DPEP1P16444 411 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 TMF1P82094 1093 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 DALRD3Q5D0E6 543 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 AMIGO3Q86WK7 504 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 COG3Q96JB2 828 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 PUS7Q96PZ0 661 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 RRAGCQ9HB90 399 aa7.58□□□□□ -1.2
SAMMSON-227ENST00000642114 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 RHOQP17081 205 aa7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 RNF144AP50876 292 aaPredicted RBP7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 LYPD4Q6UWN0 246 aa7.57□□□□□ -1.2
SAMMSON-227ENST00000642114 LINC00116Q8NCU8 138 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms