RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SRRM4-204ENST00000641899 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
SRRM4-204ENST00000641899 WNT10BO00744 389 aa19.41■□□□□ 0.7
SRRM4-204ENST00000641899 MKRN3Q13064 507 aaKnown RBP19.41■□□□□ 0.7
SRRM4-204ENST00000641899 CCDC85AQ96PX6 553 aaPredicted RBP19.41■□□□□ 0.7
SRRM4-204ENST00000641899 BSDC1Q9NW68 430 aaPredicted RBP19.41■□□□□ 0.7
SRRM4-204ENST00000641899 TAF1P21675 1872 aa19.41■□□□□ 0.7
SRRM4-204ENST00000641899 MANSC4A6NHS7 340 aaPredicted RBP19.4■□□□□ 0.7
SRRM4-204ENST00000641899 DACT2Q5SW24 774 aa19.4■□□□□ 0.7
SRRM4-204ENST00000641899 PRAMEF18Q5VWM3 479 aa19.4■□□□□ 0.7
SRRM4-204ENST00000641899 CTSWP56202 376 aa19.39■□□□□ 0.69
SRRM4-204ENST00000641899 NEXNQ0ZGT2 675 aa19.39■□□□□ 0.69
SRRM4-204ENST00000641899 OTUD7BQ6GQQ9 843 aa19.39■□□□□ 0.69
SRRM4-204ENST00000641899 METTL22Q9BUU2 404 aaPredicted RBP19.39■□□□□ 0.69
SRRM4-204ENST00000641899 LEMD3Q9Y2U8 911 aa19.39■□□□□ 0.69
SRRM4-204ENST00000641899 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 IGHMBP2P38935 993 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 CCT4P50991 539 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 GNAI1P63096 354 aa19.38■□□□□ 0.69
SRRM4-204ENST00000641899 PTPN12Q05209 780 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 CCDC30Q5VVM6 783 aa19.38■□□□□ 0.69
SRRM4-204ENST00000641899 SLC10A4Q96EP9 437 aa19.38■□□□□ 0.69
SRRM4-204ENST00000641899 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
SRRM4-204ENST00000641899 MINPP1Q9UNW1 487 aa19.38■□□□□ 0.69
SRRM4-204ENST00000641899 SCAF8Q9UPN6 1271 aaKnown RBP19.38■□□□□ 0.69
SRRM4-204ENST00000641899 UNCXA6NJT0 531 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 SPRYD7Q5W111 196 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 TTLL5Q6EMB2 1281 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 ANKRD2Q9GZV1 360 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 IFT57Q9NWB7 429 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
SRRM4-204ENST00000641899 TRIM17Q9Y577 477 aa19.37■□□□□ 0.69
SRRM4-204ENST00000641899 POLR2AP24928 1970 aaKnown RBP19.37■□□□□ 0.69
SRRM4-204ENST00000641899 MYO1BO43795 1136 aa19.36■□□□□ 0.69
SRRM4-204ENST00000641899 SASH1O94885 1247 aa19.36■□□□□ 0.69
SRRM4-204ENST00000641899 ZBTB48P10074 688 aaPredicted RBP19.36■□□□□ 0.69
SRRM4-204ENST00000641899 PRKG1Q13976 671 aa19.36■□□□□ 0.69
SRRM4-204ENST00000641899 ERO1AQ96HE7 468 aa19.36■□□□□ 0.69
SRRM4-204ENST00000641899 PPP2R3BQ9Y5P8 575 aa19.36■□□□□ 0.69
SRRM4-204ENST00000641899 COL1A1P02452 1464 aaPredicted RBP19.35■□□□□ 0.69
SRRM4-204ENST00000641899 KCNJ4P48050 445 aa19.35■□□□□ 0.69
SRRM4-204ENST00000641899 SUPT20HL1Q3ZLR7 823 aa19.35■□□□□ 0.69
SRRM4-204ENST00000641899 LDLRAD1Q5T700 205 aa19.35■□□□□ 0.69
SRRM4-204ENST00000641899 SCN9AQ15858 1988 aa19.35■□□□□ 0.69
SRRM4-204ENST00000641899 ARHGEF6Q15052 776 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 DLGAP5Q15398 846 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 IFNL1Q8IU54 200 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 KIAA0825Q8IV33 1275 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 TTLL11Q8NHH1 800 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
SRRM4-204ENST00000641899 COL4A1P02462 1669 aa19.33■□□□□ 0.69
SRRM4-204ENST00000641899 ELL2O00472 640 aaPredicted RBP19.33■□□□□ 0.68
SRRM4-204ENST00000641899 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
SRRM4-204ENST00000641899 DEFB129Q9H1M3 183 aa19.33■□□□□ 0.68
SRRM4-204ENST00000641899 MAP3K2Q9Y2U5 619 aa19.33■□□□□ 0.68
SRRM4-204ENST00000641899 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 HABP4Q5JVS0 413 aaKnown RBP19.32■□□□□ 0.68
SRRM4-204ENST00000641899 KSR2Q6VAB6 950 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 OTOP1Q7RTM1 612 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 GREM2Q9H772 168 aa19.32■□□□□ 0.68
SRRM4-204ENST00000641899 ZNF853P0CG23 659 aa19.31■□□□□ 0.68
SRRM4-204ENST00000641899 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
SRRM4-204ENST00000641899 GTF2IP78347 998 aa19.31■□□□□ 0.68
SRRM4-204ENST00000641899 MAP3K11Q16584 847 aa19.31■□□□□ 0.68
SRRM4-204ENST00000641899 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
SRRM4-204ENST00000641899 TMEM106CQ9BVX2 250 aa19.3■□□□□ 0.68
SRRM4-204ENST00000641899 WNK4Q96J92 1243 aa19.29■□□□□ 0.68
SRRM4-204ENST00000641899 EFCC1Q9HA90 598 aa19.29■□□□□ 0.68
SRRM4-204ENST00000641899 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
SRRM4-204ENST00000641899 NBPF11Q86T75 865 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 MTMR14Q8NCE2 650 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 R3HDMLQ9H3Y0 253 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
SRRM4-204ENST00000641899 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 PSME4Q14997 1843 aa19.28■□□□□ 0.68
SRRM4-204ENST00000641899 ITGA6P23229 1130 aa19.27■□□□□ 0.68
SRRM4-204ENST00000641899 ZBED3Q96IU2 234 aaPredicted RBP19.27■□□□□ 0.68
SRRM4-204ENST00000641899 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
SRRM4-204ENST00000641899 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
SRRM4-204ENST00000641899 SP3Q02447 781 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 UBE3BQ7Z3V4 1068 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 ANKRD13AQ8IZ07 590 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 ARMC5Q96C12 935 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 CD209Q9NNX6 404 aa19.26■□□□□ 0.67
SRRM4-204ENST00000641899 POTEFA5A3E0 1075 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 IGKV5-2P06315 115 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 TXNRD3Q86VQ6 643 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 C8orf58Q8NAV2 365 aa19.25■□□□□ 0.67
SRRM4-204ENST00000641899 H7C1W4 665 aa19.24■□□□□ 0.67
SRRM4-204ENST00000641899 IGF2BP3O00425 579 aaKnown RBP eCLIP19.24■□□□□ 0.67
SRRM4-204ENST00000641899 FKBP1AP62942 108 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms