RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TMEM63CQ9P1W3 806 aa21.25■□□□□ 0.99
PHGDH-226ENST00000641756 MTMR6Q9Y217 621 aa21.25■□□□□ 0.99
PHGDH-226ENST00000641756 USP48Q86UV5 1035 aa21.25■□□□□ 0.99
PHGDH-226ENST00000641756 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
PHGDH-226ENST00000641756 CNPY2Q9Y2B0 182 aa21.25■□□□□ 0.99
PHGDH-226ENST00000641756 VPS37CA5D8V6 355 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-226ENST00000641756 GADD45BO75293 160 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-226ENST00000641756 KCNQ4P56696 695 aa21.24■□□□□ 0.99
PHGDH-226ENST00000641756 SMARCC1Q92922 1105 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-226ENST00000641756 SEC31BQ9NQW1 1179 aa21.24■□□□□ 0.99
PHGDH-226ENST00000641756 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
PHGDH-226ENST00000641756 ZNF445P59923 1031 aa21.23■□□□□ 0.99
PHGDH-226ENST00000641756 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
PHGDH-226ENST00000641756 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
PHGDH-226ENST00000641756 MBD3O95983 291 aa21.23■□□□□ 0.99
PHGDH-226ENST00000641756 HSP90B1P14625 803 aaKnown RBP21.23■□□□□ 0.99
PHGDH-226ENST00000641756 ABCC12Q96J65 1359 aa21.23■□□□□ 0.99
PHGDH-226ENST00000641756 BCL9LQ86UU0 1499 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 ZFYP08048 801 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-226ENST00000641756 AK7Q96M32 723 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 PUS7LQ9H0K6 701 aaKnown RBP21.22■□□□□ 0.99
PHGDH-226ENST00000641756 LRP5O75197 1615 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 AKAP11Q9UKA4 1901 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 PHKA1P46020 1223 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 PARP10Q53GL7 1025 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 LARP1BQ659C4 914 aaKnown RBP21.22■□□□□ 0.99
PHGDH-226ENST00000641756 LINC00116Q8NCU8 138 aa21.22■□□□□ 0.99
PHGDH-226ENST00000641756 CICQ96RK0 1608 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-226ENST00000641756 E7EWF7 191 aa21.21■□□□□ 0.99
PHGDH-226ENST00000641756 NTSR2O95665 410 aa21.21■□□□□ 0.99
PHGDH-226ENST00000641756 FGD1P98174 961 aa21.21■□□□□ 0.99
PHGDH-226ENST00000641756 VPS72Q15906 364 aa21.21■□□□□ 0.99
PHGDH-226ENST00000641756 BRF1Q92994 677 aa21.21■□□□□ 0.99
PHGDH-226ENST00000641756 SNAP23O00161 211 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 TPRNQ4KMQ1 711 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 PTF1AQ7RTS3 328 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 APPBP2Q92624 585 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 DDX60Q8IY21 1712 aaKnown RBP21.2■□□□□ 0.98
PHGDH-226ENST00000641756 MROH5Q6ZUA9 1318 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 COL5A3P25940 1745 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-226ENST00000641756 FOXP2O15409 715 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 PUM3Q15397 648 aaKnown RBP21.2■□□□□ 0.98
PHGDH-226ENST00000641756 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
PHGDH-226ENST00000641756 MPHOSPH8Q99549 860 aa21.2■□□□□ 0.98
PHGDH-226ENST00000641756 MYH7P12883 1935 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 HMGB1P09429 215 aaKnown RBP21.19■□□□□ 0.98
PHGDH-226ENST00000641756 GTF3C6Q969F1 213 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 PIH1D3Q9NQM4 214 aaKnown RBP21.19■□□□□ 0.98
PHGDH-226ENST00000641756 ATP6V1DQ9Y5K8 247 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 SYCE3A1L190 88 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 FIBPO43427 364 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 FGFR2P21802 821 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 CDC37L1Q7L3B6 337 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 LPIN2Q92539 896 aa21.19■□□□□ 0.98
PHGDH-226ENST00000641756 ZNF512BQ96KM6 892 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-226ENST00000641756 JAK2O60674 1132 aa21.18■□□□□ 0.98
PHGDH-226ENST00000641756 DNM1Q05193 864 aaKnown RBP21.18■□□□□ 0.98
PHGDH-226ENST00000641756 SMIM5Q71RC9 77 aa21.18■□□□□ 0.98
PHGDH-226ENST00000641756 CHST3Q7LGC8 479 aa21.18■□□□□ 0.98
PHGDH-226ENST00000641756 TMEM87AQ8NBN3 555 aa21.18■□□□□ 0.98
PHGDH-226ENST00000641756 HAND2P61296 217 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 CCDC152Q4G0S7 254 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.981e-14■□□□□ 11
PHGDH-226ENST00000641756 MYO5AQ9Y4I1 1855 aaKnown RBP21.17■□□□□ 0.98
PHGDH-226ENST00000641756 GPAA1O43292 621 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
PHGDH-226ENST00000641756 ARID4AP29374 1257 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-226ENST00000641756 EXOSC10Q01780 885 aaKnown RBP21.17■□□□□ 0.98
PHGDH-226ENST00000641756 APOBRQ0VD83 1088 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 FERMT3Q86UX7 667 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 ZNF652Q9Y2D9 606 aa21.17■□□□□ 0.98
PHGDH-226ENST00000641756 ADD2P35612 726 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 SLC9C2Q5TAH2 1124 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 FGAP02671 866 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 SLC5A1P13866 664 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 PDCP20941 246 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 SCRN1Q12765 414 aa21.16■□□□□ 0.98
PHGDH-226ENST00000641756 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
PHGDH-226ENST00000641756 BCORQ6W2J9 1755 aa21.15■□□□□ 0.98
PHGDH-226ENST00000641756 UQCRFS1P1P0C7P4 283 aa21.15■□□□□ 0.98
PHGDH-226ENST00000641756 NASPP49321 788 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-226ENST00000641756 CTNNA3Q9UI47 895 aa21.15■□□□□ 0.98
PHGDH-226ENST00000641756 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
PHGDH-226ENST00000641756 IGHMBP2P38935 993 aaKnown RBP21.14■□□□□ 0.98
PHGDH-226ENST00000641756 IMMTQ16891 758 aaKnown RBP21.14■□□□□ 0.98
PHGDH-226ENST00000641756 FAM182BQ5T319 152 aa21.14■□□□□ 0.98
PHGDH-226ENST00000641756 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.98
PHGDH-226ENST00000641756 RBSNQ9H1K0 784 aa21.14■□□□□ 0.98
PHGDH-226ENST00000641756 LRSAM1Q6UWE0 723 aa21.14■□□□□ 0.97
PHGDH-226ENST00000641756 DDX11Q96FC9 970 aa21.14■□□□□ 0.97
PHGDH-226ENST00000641756 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.97
PHGDH-226ENST00000641756 COL4A1P02462 1669 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 FAM173BQ6P4H8 233 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 BICDL1Q6ZP65 573 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 FNBP4Q8N3X1 1017 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-226ENST00000641756 USP21Q9UK80 565 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 NAP1L2Q9ULW6 460 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-226ENST00000641756 ZNF532Q9HCE3 1301 aa21.13■□□□□ 0.97
PHGDH-226ENST00000641756 LAMB2P55268 1798 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms