RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 FAM89AQ96GI7 184 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 SEC31BQ9NQW1 1179 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 EYSQ5T1H1 3165 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 ZNF853P0CG23 659 aa9.57□□□□□ -0.88
PHGDH-225ENST00000641720 EIF2S2P20042 333 aaKnown RBP9.57□□□□□ -0.88
PHGDH-225ENST00000641720 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
PHGDH-225ENST00000641720 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
PHGDH-225ENST00000641720 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-225ENST00000641720 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
PHGDH-225ENST00000641720 TSPYL4Q9UJ04 414 aa9.57□□□□□ -0.88
PHGDH-225ENST00000641720 COL1A1P02452 1464 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-225ENST00000641720 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 CHL1O00533 1208 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 WNT10BO00744 389 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 FKTNO75072 461 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 RPS8P62241 208 aaKnown RBP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 HNRNPUQ00839 825 aaKnown RBP eCLIP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 AIMP1Q12904 312 aaKnown RBP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 DACT2Q5SW24 774 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 OTOP1Q7RTM1 612 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 PLBD2Q8NHP8 589 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 TMX4Q9H1E5 349 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
PHGDH-225ENST00000641720 IL16Q14005 1332 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 IRS2Q9Y4H2 1338 aa9.56□□□□□ -0.88
PHGDH-225ENST00000641720 MED23Q9ULK4 1368 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 UFL1O94874 794 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 MAP3K11Q16584 847 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 SPRYD7Q5W111 196 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 TSR2Q969E8 191 aaKnown RBP9.55□□□□□ -0.88
PHGDH-225ENST00000641720 EYA3Q99504 573 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 MXD3Q9BW11 206 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 FZD1Q9UP38 647 aa9.55□□□□□ -0.88
PHGDH-225ENST00000641720 MYH13Q9UKX3 1938 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-225ENST00000641720 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 GJA5P36382 358 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 GNAI1P63096 354 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 CALD1Q05682 793 aaKnown RBP9.54□□□□□ -0.88
PHGDH-225ENST00000641720 WDR63Q8IWG1 891 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 OTUD5Q96G74 571 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 HDAC9Q9UKV0 1011 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 AOX1Q06278 1338 aa9.54□□□□□ -0.88
PHGDH-225ENST00000641720 EN2P19622 333 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-225ENST00000641720 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
PHGDH-225ENST00000641720 TXNRD3Q86VQ6 643 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 ZC3H12CQ9C0D7 883 aaKnown RBP9.53□□□□□ -0.88
PHGDH-225ENST00000641720 PRO3102Q9H379 93 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-225ENST00000641720 PTPN22Q9Y2R2 807 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 XDHP47989 1333 aa9.53□□□□□ -0.88
PHGDH-225ENST00000641720 MUC3AQ02505 3323 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 HOXB7P09629 217 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-225ENST00000641720 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 IFNL1Q8IU54 200 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-225ENST00000641720 C8orf58Q8NAV2 365 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 PRUNE2Q8WUY3 3088 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 CLMNQ96JQ2 1002 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 PTPN18Q99952 460 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 ZBED9Q6R2W3 1325 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 CDH23Q9H251 3354 aa9.52□□□□□ -0.89
PHGDH-225ENST00000641720 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-225ENST00000641720 SASH1O94885 1247 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
PHGDH-225ENST00000641720 WNK4Q96J92 1243 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 ZNF333Q96JL9 665 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 TRIM17Q9Y577 477 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 PCDHAC2Q9Y5I4 1007 aa9.51□□□□□ -0.89
PHGDH-225ENST00000641720 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-225ENST00000641720 KLRK1P26718 216 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 SLFN5Q08AF3 891 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 CRHR2Q13324 411 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 DNAH12Q6ZR08 3092 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
PHGDH-225ENST00000641720 E9PSI1 815 aa9.49□□□□□ -0.89
PHGDH-225ENST00000641720 ELL2O00472 640 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-225ENST00000641720 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-225ENST00000641720 EXOSC9Q06265 439 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms