RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 USP54Q70EL1 1684 aa10.31□□□□□ -0.76
CASC19-240ENST00000641578 ZNF521Q96K83 1311 aa10.31□□□□□ -0.76
CASC19-240ENST00000641578 ATP5J2-PTCD1G3V325 749 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 MEN1O00255 615 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 CD163Q86VB7 1156 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 NGDNQ8NEJ9 315 aaKnown RBP10.3□□□□□ -0.76
CASC19-240ENST00000641578 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 NUCKS1Q9H1E3 243 aaKnown RBP10.3□□□□□ -0.76
CASC19-240ENST00000641578 POLKQ9UBT6 870 aa10.3□□□□□ -0.76
CASC19-240ENST00000641578 ERICH6BQ5W0A0 696 aa10.29□□□□□ -0.76
CASC19-240ENST00000641578 FAM196AQ6ZSG2 479 aa10.29□□□□□ -0.76
CASC19-240ENST00000641578 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
CASC19-240ENST00000641578 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
CASC19-240ENST00000641578 MARF1Q9Y4F3 1742 aaKnown RBP10.29□□□□□ -0.76
CASC19-240ENST00000641578 SPATA31A3Q5VYP0 1347 aa10.29□□□□□ -0.76
CASC19-240ENST00000641578 MAP2P11137 1827 aaKnown RBP10.28□□□□□ -0.76
CASC19-240ENST00000641578 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
CASC19-240ENST00000641578 THBS1P07996 1170 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 NBPF10Q6P3W6 841 aaKnown RBP10.28□□□□□ -0.76
CASC19-240ENST00000641578 DZIP3Q86Y13 1208 aaKnown RBP10.28□□□□□ -0.76
CASC19-240ENST00000641578 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
CASC19-240ENST00000641578 RNF123Q5XPI4 1314 aa10.28□□□□□ -0.76
CASC19-240ENST00000641578 ARHGEF10O15013 1369 aa10.27□□□□□ -0.76
CASC19-240ENST00000641578 APAF1O14727 1248 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
CASC19-240ENST00000641578 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.771e-15■■■□□ 14.9
CASC19-240ENST00000641578 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
CASC19-240ENST00000641578 CCDC27Q2M243 656 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 PMFBP1Q8TBY8 1022 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
CASC19-240ENST00000641578 GLI3P10071 1580 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 KIF1AQ12756 1690 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 PXDNQ92626 1479 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 KCNQ2O43526 872 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 AP1G2O75843 785 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 APBA3O96018 575 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 CHRNA4P43681 627 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
CASC19-240ENST00000641578 ZMYM1Q5SVZ6 1142 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 CCDC146Q8IYE0 955 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 PNMA1Q8ND90 353 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
CASC19-240ENST00000641578 F11P03951 625 aa10.25□□□□□ -0.77
CASC19-240ENST00000641578 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
CASC19-240ENST00000641578 TRMT2AQ8IZ69 625 aaKnown RBP10.25□□□□□ -0.77
CASC19-240ENST00000641578 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
CASC19-240ENST00000641578 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
CASC19-240ENST00000641578 RGPD1P0DJD0 1748 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 U2SURPO15042 1029 aaKnown RBP10.24□□□□□ -0.77
CASC19-240ENST00000641578 C1QTNF8P60827 252 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 SLFN5Q08AF3 891 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 EZH2Q15910 746 aaKnown RBP10.24□□□□□ -0.77
CASC19-240ENST00000641578 WDR44Q5JSH3 913 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 PLEKHF1Q96S99 279 aa10.24□□□□□ -0.77
CASC19-240ENST00000641578 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 E9PSI1 815 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 IL13P35225 146 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 WDR63Q8IWG1 891 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
CASC19-240ENST00000641578 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 RCAN3Q9UKA8 241 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
CASC19-240ENST00000641578 EP400Q96L91 3159 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 GNB5O14775 395 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 DUSP27Q5VZP5 1158 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 CAMKK2Q96RR4 588 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 MAPK8IP3Q9UPT6 1336 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 SBNO1A3KN83 1393 aa10.22□□□□□ -0.77
CASC19-240ENST00000641578 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.77
CASC19-240ENST00000641578 TRIM37O94972 964 aa10.21□□□□□ -0.77
CASC19-240ENST00000641578 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
CASC19-240ENST00000641578 DOC2BQ14184 412 aa10.21□□□□□ -0.77
CASC19-240ENST00000641578 FLT4P35916 1363 aa10.21□□□□□ -0.78
CASC19-240ENST00000641578 TNS3Q68CZ2 1445 aa10.21□□□□□ -0.78
CASC19-240ENST00000641578 PEAK1Q9H792 1746 aa10.21□□□□□ -0.78
CASC19-240ENST00000641578 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 RTL1A6NKG5 1358 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 NEFMP07197 916 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 AMPD1P23109 780 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 FBLN1P23142 703 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 RRS1Q15050 365 aaKnown RBP10.2□□□□□ -0.78
CASC19-240ENST00000641578 MAP3K19Q56UN5 1328 aa10.2□□□□□ -0.78
CASC19-240ENST00000641578 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms