RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 USP50Q70EL3 339 aaPredicted RBP20.7■□□□□ 0.9
RGPD1-205ENST00000641339 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
RGPD1-205ENST00000641339 ADARB2Q9NS39 739 aaKnown RBP20.7■□□□□ 0.9
RGPD1-205ENST00000641339 PCNTO95613 3336 aa20.7■□□□□ 0.9
RGPD1-205ENST00000641339 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
RGPD1-205ENST00000641339 ITGBL1O95965 494 aaPredicted RBP20.69■□□□□ 0.9
RGPD1-205ENST00000641339 RPS12P25398 132 aaKnown RBP20.69■□□□□ 0.9
RGPD1-205ENST00000641339 KCNJ4P48050 445 aa20.69■□□□□ 0.9
RGPD1-205ENST00000641339 HIRAP54198 1017 aaPredicted RBP20.69■□□□□ 0.9
RGPD1-205ENST00000641339 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
RGPD1-205ENST00000641339 SCN9AQ15858 1988 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 USP17L3A6NCW0 530 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 USP17L4A6NCW7 530 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 GNAI3P08754 354 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 RLBP1P12271 317 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 USP17L1Q7RTZ2 530 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 GMLQ99445 158 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 CLEC11AQ9Y240 323 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 MROH5Q6ZUA9 1318 aa20.68■□□□□ 0.9
RGPD1-205ENST00000641339 MAP1SQ66K74 1059 aaPredicted RBP20.67■□□□□ 0.9
RGPD1-205ENST00000641339 RSBN1LQ6PCB5 846 aaPredicted RBP20.67■□□□□ 0.9
RGPD1-205ENST00000641339 VGLL2Q8N8G2 317 aa20.67■□□□□ 0.9
RGPD1-205ENST00000641339 CD209Q9NNX6 404 aa20.67■□□□□ 0.9
RGPD1-205ENST00000641339 HDAC5Q9UQL6 1122 aa20.67■□□□□ 0.9
RGPD1-205ENST00000641339 EGFRP00533 1210 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 UBE4AQ14139 1066 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 DACT2Q5SW24 774 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 DZIP1LQ8IYY4 767 aaKnown RBP20.66■□□□□ 0.9
RGPD1-205ENST00000641339 CNTROBQ8N137 903 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 TRPM4Q8TD43 1214 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 PGAP2Q9UHJ9 254 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 PASKQ96RG2 1323 aa20.66■□□□□ 0.9
RGPD1-205ENST00000641339 ZNF609O15014 1411 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 H7C1D1 291 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 STRIP1Q5VSL9 837 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 ATG9AQ7Z3C6 839 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 AGBL3Q8NEM8 1001 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
RGPD1-205ENST00000641339 EYA2O00167 538 aa20.64■□□□□ 0.89
RGPD1-205ENST00000641339 PDE8BO95263 885 aa20.64■□□□□ 0.89
RGPD1-205ENST00000641339 METTL24Q5JXM2 366 aa20.64■□□□□ 0.89
RGPD1-205ENST00000641339 A0A1B0GUL6 1792 aa20.64■□□□□ 0.89
RGPD1-205ENST00000641339 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
RGPD1-205ENST00000641339 IL1R1P14778 569 aa20.63■□□□□ 0.89
RGPD1-205ENST00000641339 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
RGPD1-205ENST00000641339 MTX1Q13505 466 aa20.63■□□□□ 0.89
RGPD1-205ENST00000641339 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
RGPD1-205ENST00000641339 JMYQ8N9B5 988 aa20.63■□□□□ 0.89
RGPD1-205ENST00000641339 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
RGPD1-205ENST00000641339 GNAI2P04899 355 aa20.62■□□□□ 0.89
RGPD1-205ENST00000641339 GTF2IP78347 998 aa20.62■□□□□ 0.89
RGPD1-205ENST00000641339 TBC1D10BQ4KMP7 808 aaPredicted RBP20.62■□□□□ 0.89
RGPD1-205ENST00000641339 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
RGPD1-205ENST00000641339 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
RGPD1-205ENST00000641339 PA2G4Q9UQ80 394 aaKnown RBP20.62■□□□□ 0.89
RGPD1-205ENST00000641339 FGFR2P21802 821 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 GYG1P46976 350 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 ZNF804AQ7Z570 1209 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 ZC3H15Q8WU90 426 aaKnown RBP20.61■□□□□ 0.89
RGPD1-205ENST00000641339 SIL1Q9H173 461 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 FBXO3Q9UK99 471 aa20.61■□□□□ 0.89
RGPD1-205ENST00000641339 CIAO1O76071 339 aa20.6■□□□□ 0.89
RGPD1-205ENST00000641339 FMR1Q06787 632 aaKnown RBP eCLIP20.6■□□□□ 0.89
RGPD1-205ENST00000641339 FBXO33Q7Z6M2 555 aa20.6■□□□□ 0.89
RGPD1-205ENST00000641339 PANK1Q8TE04 598 aa20.6■□□□□ 0.89
RGPD1-205ENST00000641339 SRGAP3O43295 1099 aa20.59■□□□□ 0.89
RGPD1-205ENST00000641339 USP17L8P0C7I0 530 aa20.59■□□□□ 0.89
RGPD1-205ENST00000641339 HIBADHP31937 336 aaKnown RBP20.59■□□□□ 0.89
RGPD1-205ENST00000641339 RBM26Q5T8P6 1007 aaKnown RBP20.59■□□□□ 0.89
RGPD1-205ENST00000641339 ITPRIPQ8IWB1 547 aa20.59■□□□□ 0.89
RGPD1-205ENST00000641339 TDRD7Q8NHU6 1098 aaKnown RBP20.59■□□□□ 0.89
RGPD1-205ENST00000641339 FBXW7Q969H0 707 aa20.59■□□□□ 0.89
RGPD1-205ENST00000641339 PSME4Q14997 1843 aa20.59■□□□□ 0.89
RGPD1-205ENST00000641339 ZNF646O15015 1829 aaPredicted RBP20.58■□□□□ 0.89
RGPD1-205ENST00000641339 PNMA6EA0A0J9YXQ4 647 aa20.58■□□□□ 0.89
RGPD1-205ENST00000641339 SASH1O94885 1247 aa20.58■□□□□ 0.89
RGPD1-205ENST00000641339 KIF4BQ2VIQ3 1234 aa20.58■□□□□ 0.89
RGPD1-205ENST00000641339 CERS5Q8N5B7 392 aa20.58■□□□□ 0.89
RGPD1-205ENST00000641339 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
RGPD1-205ENST00000641339 TRAF5O00463 557 aa20.57■□□□□ 0.88
RGPD1-205ENST00000641339 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
RGPD1-205ENST00000641339 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
RGPD1-205ENST00000641339 CREBZFQ9NS37 354 aa20.57■□□□□ 0.88
RGPD1-205ENST00000641339 IL15P40933 162 aaPredicted RBP20.56■□□□□ 0.88
RGPD1-205ENST00000641339 MKRN1Q9UHC7 482 aaKnown RBP20.56■□□□□ 0.88
RGPD1-205ENST00000641339 ASTN2O75129 1339 aaPredicted RBP20.55■□□□□ 0.88
RGPD1-205ENST00000641339 FAM205AQ6ZU69 1335 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 BCAMP50895 628 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 FKBP1AP62942 108 aaKnown RBP20.55■□□□□ 0.88
RGPD1-205ENST00000641339 ATP8B2P98198 1209 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 COL13A1Q5TAT6 717 aaPredicted RBP20.55■□□□□ 0.88
RGPD1-205ENST00000641339 CST9Q5W186 159 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 LPIN2Q92539 896 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 GLIS2Q9BZE0 524 aaPredicted RBP20.55■□□□□ 0.88
RGPD1-205ENST00000641339 CEP126Q9P2H0 1117 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 JAG2Q9Y219 1238 aa20.55■□□□□ 0.88
RGPD1-205ENST00000641339 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms