RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
SP3-208ENST00000640958 CASZ1Q86V15 1759 aa24.32■■□□□ 1.48
SP3-208ENST00000640958 STX6O43752 255 aa24.32■■□□□ 1.48
SP3-208ENST00000640958 GJB2P29033 226 aa24.32■■□□□ 1.48
SP3-208ENST00000640958 MCAMP43121 646 aa24.32■■□□□ 1.48
SP3-208ENST00000640958 STOX1Q6ZVD7 989 aa24.32■■□□□ 1.48
SP3-208ENST00000640958 RTL9Q8NET4 1388 aa24.31■■□□□ 1.48
SP3-208ENST00000640958 MROH5Q6ZUA9 1318 aa24.31■■□□□ 1.48
SP3-208ENST00000640958 ZSCAN22P10073 491 aaPredicted RBP24.31■■□□□ 1.48
SP3-208ENST00000640958 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
SP3-208ENST00000640958 GPT2Q8TD30 523 aa24.31■■□□□ 1.48
SP3-208ENST00000640958 FGFR2P21802 821 aa24.31■■□□□ 1.48
SP3-208ENST00000640958 GAS2L3Q86XJ1 694 aa24.3■■□□□ 1.48
SP3-208ENST00000640958 PUM3Q15397 648 aaKnown RBP24.29■■□□□ 1.48
SP3-208ENST00000640958 CNTNAP4Q9C0A0 1308 aa24.29■■□□□ 1.48
SP3-208ENST00000640958 MRE11P49959 708 aa24.29■■□□□ 1.48
SP3-208ENST00000640958 ZNF652Q9Y2D9 606 aa24.29■■□□□ 1.48
SP3-208ENST00000640958 SPATA31A6Q5VVP1 1343 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 APPBP2Q92624 585 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 SEC31BQ9NQW1 1179 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 FOXP2O15409 715 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 ARID4AP29374 1257 aaPredicted RBP24.28■■□□□ 1.48
SP3-208ENST00000640958 PTF1AQ7RTS3 328 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 LPIN2Q92539 896 aa24.28■■□□□ 1.48
SP3-208ENST00000640958 DOCK2Q92608 1830 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 F13A1P00488 732 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 CCDC152Q4G0S7 254 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 CAVIN1Q6NZI2 390 aaKnown RBP24.27■■□□□ 1.48
SP3-208ENST00000640958 CLEC4GQ6UXB4 293 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 COL4A1P02462 1669 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 A0A1B0GUL6 1792 aa24.27■■□□□ 1.48
SP3-208ENST00000640958 A0A0G2JLW4 131 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 DTNBO60941 627 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 HSP90B1P14625 803 aaKnown RBP24.26■■□□□ 1.47
SP3-208ENST00000640958 PHKA1P46020 1223 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 WASHC4Q2M389 1173 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 CCDC102BQ68D86 513 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 HELBQ8NG08 1087 aaPredicted RBP24.26■■□□□ 1.47
SP3-208ENST00000640958 GRPEL1Q9HAV7 217 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 USP21Q9UK80 565 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 MTMR6Q9Y217 621 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 ATRNO75882 1429 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 HMGB1P09429 215 aaKnown RBP24.26■■□□□ 1.47
SP3-208ENST00000640958 NCLP19338 710 aaKnown RBP24.26■■□□□ 1.47
SP3-208ENST00000640958 Q6ZUG5 572 aa24.26■■□□□ 1.47
SP3-208ENST00000640958 MBD3O95983 291 aa24.25■■□□□ 1.47
SP3-208ENST00000640958 UQCRFS1P1P0C7P4 283 aa24.25■■□□□ 1.47
SP3-208ENST00000640958 KCNQ4P56696 695 aa24.25■■□□□ 1.47
SP3-208ENST00000640958 NSFL1CQ9UNZ2 370 aaKnown RBP24.25■■□□□ 1.47
SP3-208ENST00000640958 ZNF445P59923 1031 aa24.24■■□□□ 1.47
SP3-208ENST00000640958 FOXD4L6Q3SYB3 417 aaPredicted RBP24.24■■□□□ 1.47
SP3-208ENST00000640958 FOXD4L3Q6VB84 417 aaPredicted RBP24.24■■□□□ 1.47
SP3-208ENST00000640958 TMEM87AQ8NBN3 555 aa24.24■■□□□ 1.47
SP3-208ENST00000640958 MPHOSPH8Q99549 860 aa24.24■■□□□ 1.47
SP3-208ENST00000640958 PUS7LQ9H0K6 701 aaKnown RBP24.24■■□□□ 1.47
SP3-208ENST00000640958 PIH1D3Q9NQM4 214 aaKnown RBP24.24■■□□□ 1.47
SP3-208ENST00000640958 E7EWF7 191 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 ADD2P35612 726 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 TTF1Q15361 905 aaPredicted RBP24.23■■□□□ 1.47
SP3-208ENST00000640958 DHX32Q7L7V1 743 aaKnown RBP24.23■■□□□ 1.47
SP3-208ENST00000640958 GTF3C6Q969F1 213 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.23■■□□□ 1.47
SP3-208ENST00000640958 SBF2Q86WG5 1849 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 TAF1LQ8IZX4 1826 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 RGL2O15211 777 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 SLC5A1P13866 664 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 ZSCAN23Q3MJ62 389 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 TTLL5Q6EMB2 1281 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 PANK2Q9BZ23 570 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 LY75O60449 1722 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 COL24A1Q17RW2 1714 aa24.23■■□□□ 1.47
SP3-208ENST00000640958 EXOSC10Q01780 885 aaKnown RBP24.22■■□□□ 1.47
SP3-208ENST00000640958 ZSCAN25Q6NSZ9 544 aa24.22■■□□□ 1.47
SP3-208ENST00000640958 RBM27Q9P2N5 1060 aaKnown RBP24.22■■□□□ 1.47
SP3-208ENST00000640958 STK3Q13188 491 aa24.22■■□□□ 1.47
SP3-208ENST00000640958 AGXT2Q9BYV1 514 aa24.22■■□□□ 1.47
SP3-208ENST00000640958 GDPD2Q9HCC8 539 aa24.22■■□□□ 1.47
SP3-208ENST00000640958 GPAA1O43292 621 aa24.21■■□□□ 1.47
SP3-208ENST00000640958 IGHMBP2P38935 993 aaKnown RBP24.21■■□□□ 1.47
SP3-208ENST00000640958 BRF1Q92994 677 aa24.21■■□□□ 1.47
SP3-208ENST00000640958 LRRC2Q9BYS8 371 aa24.21■■□□□ 1.47
SP3-208ENST00000640958 RC3H1Q5TC82 1133 aaKnown RBP24.2■■□□□ 1.47
SP3-208ENST00000640958 USP48Q86UV5 1035 aa24.2■■□□□ 1.47
SP3-208ENST00000640958 TMEM63CQ9P1W3 806 aa24.2■■□□□ 1.47
SP3-208ENST00000640958 CTNNA3Q9UI47 895 aa24.2■■□□□ 1.47
SP3-208ENST00000640958 TAF1P21675 1872 aa24.2■■□□□ 1.46
SP3-208ENST00000640958 SNAP23O00161 211 aa24.2■■□□□ 1.46
SP3-208ENST00000640958 BCL2L12Q9HB09 334 aa24.2■■□□□ 1.46
SP3-208ENST00000640958 CNPY2Q9Y2B0 182 aa24.2■■□□□ 1.46
SP3-208ENST00000640958 ATP6V1DQ9Y5K8 247 aa24.2■■□□□ 1.46
SP3-208ENST00000640958 PDIA4P13667 645 aaKnown RBP24.19■■□□□ 1.46
SP3-208ENST00000640958 UBE3CQ15386 1083 aa24.19■■□□□ 1.46
SP3-208ENST00000640958 ERFEQ4G0M1 354 aa24.19■■□□□ 1.46
SP3-208ENST00000640958 VPS37CA5D8V6 355 aaPredicted RBP24.19■■□□□ 1.46
SP3-208ENST00000640958 PDCP20941 246 aa24.19■■□□□ 1.46
SP3-208ENST00000640958 SLC9C2Q5TAH2 1124 aa24.19■■□□□ 1.46
SP3-208ENST00000640958 LARP1BQ659C4 914 aaKnown RBP24.19■■□□□ 1.46
SP3-208ENST00000640958 GADD45BO75293 160 aaPredicted RBP24.18■■□□□ 1.46
SP3-208ENST00000640958 FGAP02671 866 aa24.18■■□□□ 1.46
SP3-208ENST00000640958 RPS6KA4O75676 772 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms