RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
VPS72-207ENST00000640458 UBE2Q2LH0YL09 131 aa23.18■■□□□ 1.3
VPS72-207ENST00000640458 ZNF280AP59817 542 aaPredicted RBP23.18■■□□□ 1.3
VPS72-207ENST00000640458 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
VPS72-207ENST00000640458 NEXNQ0ZGT2 675 aa23.18■■□□□ 1.3
VPS72-207ENST00000640458 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
VPS72-207ENST00000640458 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
VPS72-207ENST00000640458 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
VPS72-207ENST00000640458 COL4A1P02462 1669 aa23.18■■□□□ 1.3
VPS72-207ENST00000640458 SCN9AQ15858 1988 aa23.18■■□□□ 1.3
VPS72-207ENST00000640458 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
VPS72-207ENST00000640458 PCCAP05165 728 aaPredicted RBP23.17■■□□□ 1.3
VPS72-207ENST00000640458 IGKV5-2P06315 115 aa23.17■■□□□ 1.3
VPS72-207ENST00000640458 GCC1Q96CN9 775 aa23.17■■□□□ 1.3
VPS72-207ENST00000640458 GPR25O00155 361 aa23.16■■□□□ 1.3
VPS72-207ENST00000640458 UFL1O94874 794 aa23.16■■□□□ 1.3
VPS72-207ENST00000640458 RSBN1LQ6PCB5 846 aaPredicted RBP23.16■■□□□ 1.3
VPS72-207ENST00000640458 FBXO46Q6PJ61 603 aaPredicted RBP23.16■■□□□ 1.3
VPS72-207ENST00000640458 AGBL3Q8NEM8 1001 aa23.16■■□□□ 1.3
VPS72-207ENST00000640458 ANKIB1Q9P2G1 1089 aa23.16■■□□□ 1.3
VPS72-207ENST00000640458 PAPPA2Q9BXP8 1791 aa23.16■■□□□ 1.3
VPS72-207ENST00000640458 HSP90B1P14625 803 aaKnown RBP23.15■■□□□ 1.3
VPS72-207ENST00000640458 MKRN3Q13064 507 aaKnown RBP23.15■■□□□ 1.3
VPS72-207ENST00000640458 TTLL12Q14166 644 aaPredicted RBP23.15■■□□□ 1.3
VPS72-207ENST00000640458 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
VPS72-207ENST00000640458 DNAAF4Q8WXU2 420 aa23.15■■□□□ 1.3
VPS72-207ENST00000640458 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.29
VPS72-207ENST00000640458 MYOZ2Q9NPC6 264 aa23.14■■□□□ 1.29
VPS72-207ENST00000640458 GGA1Q9UJY5 639 aa23.14■■□□□ 1.29
VPS72-207ENST00000640458 USP17L8P0C7I0 530 aa23.13■■□□□ 1.29
VPS72-207ENST00000640458 CWF19L2Q2TBE0 894 aaKnown RBP23.13■■□□□ 1.29
VPS72-207ENST00000640458 PODXL2Q9NZ53 605 aa23.13■■□□□ 1.29
VPS72-207ENST00000640458 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
VPS72-207ENST00000640458 PITPNM2Q9BZ72 1349 aa23.12■■□□□ 1.29
VPS72-207ENST00000640458 TM4SF4P48230 202 aa23.12■■□□□ 1.29
VPS72-207ENST00000640458 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
VPS72-207ENST00000640458 HABP4Q5JVS0 413 aaKnown RBP23.11■■□□□ 1.29
VPS72-207ENST00000640458 LINS1Q8NG48 757 aa23.11■■□□□ 1.29
VPS72-207ENST00000640458 JARID2Q92833 1246 aaPredicted RBP23.11■■□□□ 1.29
VPS72-207ENST00000640458 PDE8AO60658 829 aa23.1■■□□□ 1.29
VPS72-207ENST00000640458 FKTNO75072 461 aa23.1■■□□□ 1.29
VPS72-207ENST00000640458 NOM1Q5C9Z4 860 aaKnown RBP23.1■■□□□ 1.29
VPS72-207ENST00000640458 MRPL50Q8N5N7 158 aaKnown RBP23.1■■□□□ 1.29
VPS72-207ENST00000640458 GMLQ99445 158 aa23.1■■□□□ 1.29
VPS72-207ENST00000640458 F6X3S4 739 aa23.09■■□□□ 1.29
VPS72-207ENST00000640458 H7C1W4 665 aa23.09■■□□□ 1.29
VPS72-207ENST00000640458 GCKRQ14397 625 aa23.09■■□□□ 1.29
VPS72-207ENST00000640458 R3HDMLQ9H3Y0 253 aa23.09■■□□□ 1.29
VPS72-207ENST00000640458 ZNF609O15014 1411 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 USP17L3A6NCW0 530 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 USP17L4A6NCW7 530 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 CT47B1P0C2W7 299 aaPredicted RBP23.08■■□□□ 1.29
VPS72-207ENST00000640458 NBPF9Q3BBW0 867 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 USP17L1Q7RTZ2 530 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 SSH1Q8WYL5 1049 aa23.08■■□□□ 1.29
VPS72-207ENST00000640458 NF2P35240 595 aa23.07■■□□□ 1.28
VPS72-207ENST00000640458 SREBF2Q12772 1141 aa23.07■■□□□ 1.28
VPS72-207ENST00000640458 ALDH1L2Q3SY69 923 aa23.07■■□□□ 1.28
VPS72-207ENST00000640458 BEND3Q5T5X7 828 aa23.07■■□□□ 1.28
VPS72-207ENST00000640458 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
VPS72-207ENST00000640458 PRKG1Q13976 671 aa23.06■■□□□ 1.28
VPS72-207ENST00000640458 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
VPS72-207ENST00000640458 PTPN12Q05209 780 aaKnown RBP23.05■■□□□ 1.28
VPS72-207ENST00000640458 CCDC85AQ96PX6 553 aaPredicted RBP23.05■■□□□ 1.28
VPS72-207ENST00000640458 CASP7P55210 303 aa23.04■■□□□ 1.28
VPS72-207ENST00000640458 UBE3BQ7Z3V4 1068 aa23.04■■□□□ 1.28
VPS72-207ENST00000640458 PODNQ7Z5L7 613 aa23.04■■□□□ 1.28
VPS72-207ENST00000640458 PTPRCP08575 1304 aa23.04■■□□□ 1.28
VPS72-207ENST00000640458 XDHP47989 1333 aa23.04■■□□□ 1.28
VPS72-207ENST00000640458 CTSWP56202 376 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 ARMC9Q7Z3E5 817 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 MXD3Q9BW11 206 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 PLA2G12BQ9BX93 195 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 CFHR5Q9BXR6 569 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 TRIM17Q9Y577 477 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 PSME4Q14997 1843 aa23.03■■□□□ 1.28
VPS72-207ENST00000640458 POTEFA5A3E0 1075 aa23.02■■□□□ 1.28
VPS72-207ENST00000640458 ATP2B4P23634 1241 aa23.02■■□□□ 1.28
VPS72-207ENST00000640458 OGFOD1Q8N543 542 aa23.02■■□□□ 1.28
VPS72-207ENST00000640458 TTLL11Q8NHH1 800 aa23.02■■□□□ 1.28
VPS72-207ENST00000640458 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
VPS72-207ENST00000640458 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.02■■□□□ 1.28
VPS72-207ENST00000640458 WNT10BO00744 389 aa23.01■■□□□ 1.27
VPS72-207ENST00000640458 ALDH1L1O75891 902 aa23.01■■□□□ 1.27
VPS72-207ENST00000640458 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
VPS72-207ENST00000640458 WTIPA6NIX2 430 aaPredicted RBP23■■□□□ 1.27
VPS72-207ENST00000640458 SASH1O94885 1247 aa23■■□□□ 1.27
VPS72-207ENST00000640458 SPRYD7Q5W111 196 aa23■■□□□ 1.27
VPS72-207ENST00000640458 SLC4A10Q6U841 1118 aa23■■□□□ 1.27
VPS72-207ENST00000640458 SRCIN1Q9C0H9 1055 aa23■■□□□ 1.27
VPS72-207ENST00000640458 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
VPS72-207ENST00000640458 ALDH1A1P00352 501 aa22.99■■□□□ 1.27
VPS72-207ENST00000640458 INTS3Q68E01 1043 aaKnown RBP22.99■■□□□ 1.27
VPS72-207ENST00000640458 DACT2Q5SW24 774 aa22.98■■□□□ 1.27
VPS72-207ENST00000640458 OTOP1Q7RTM1 612 aa22.98■■□□□ 1.27
VPS72-207ENST00000640458 ANGEL1Q9UNK9 670 aaKnown RBP22.98■■□□□ 1.27
VPS72-207ENST00000640458 GRM8O00222 908 aa22.97■■□□□ 1.27
VPS72-207ENST00000640458 CSF1RP07333 972 aa22.97■■□□□ 1.27
VPS72-207ENST00000640458 GREM2Q9H772 168 aa22.97■■□□□ 1.27
VPS72-207ENST00000640458 RARSP54136 660 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms