RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 SYCP3Q8IZU3 236 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 NLGN1Q8N2Q7 840 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 ZBTB40Q9NUA8 1239 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
SCN1B-208ENST00000640135 SAMD9LQ8IVG5 1584 aa12.66□□□□□ -0.38
SCN1B-208ENST00000640135 GOLGA6L10A6NI86 522 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 ERLIN1O75477 346 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 PRC1O43663 620 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 SFPQP23246 707 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN1B-208ENST00000640135 NCBP1Q09161 790 aaKnown RBP12.65□□□□□ -0.38
SCN1B-208ENST00000640135 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 PHKG2P15735 406 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-208ENST00000640135 ZRSR2Q15696 482 aaKnown RBP12.65□□□□□ -0.38
SCN1B-208ENST00000640135 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC174Q6PII3 467 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
SCN1B-208ENST00000640135 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-208ENST00000640135 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.39
SCN1B-208ENST00000640135 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 IGHDP01880 384 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 A1BGP04217 495 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 NMIQ13287 307 aaPredicted RBP12.64□□□□□ -0.39
SCN1B-208ENST00000640135 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
SCN1B-208ENST00000640135 ARHGEF10LQ9HCE6 1279 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 AOX1Q06278 1338 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 CCDC40Q4G0X9 1142 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
SCN1B-208ENST00000640135 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
SCN1B-208ENST00000640135 TMOD4Q9NZQ9 345 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
SCN1B-208ENST00000640135 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
SCN1B-208ENST00000640135 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
SCN1B-208ENST00000640135 RXRBP28702 533 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 SSR1P43307 286 aaKnown RBP12.63□□□□□ -0.39
SCN1B-208ENST00000640135 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
SCN1B-208ENST00000640135 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 YEATS4O95619 227 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 GCKRQ14397 625 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
SCN1B-208ENST00000640135 SEPT7Q16181 437 aaKnown RBP12.63□□□□□ -0.39
SCN1B-208ENST00000640135 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
SCN1B-208ENST00000640135 NEFHP12036 1026 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 BRDTQ58F21 947 aaPredicted RBP12.62□□□□□ -0.39
SCN1B-208ENST00000640135 MPNDQ8N594 471 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TNPO1Q92973 898 aaKnown RBP12.62□□□□□ -0.39
SCN1B-208ENST00000640135 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 ADCY10Q96PN6 1610 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TRIM75PA6NK02 468 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
SCN1B-208ENST00000640135 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 KIF4AO95239 1232 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 UBE2HP62256 183 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 SPAG1Q07617 926 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 APPBP2Q92624 585 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 NEMFO60524 1076 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 SSFA2P28290 1259 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 STX1AQ16623 288 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 Q6ZUG5 572 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 APBB1IPQ7Z5R6 666 aaPredicted RBP12.62□□□□□ -0.39
SCN1B-208ENST00000640135 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
SCN1B-208ENST00000640135 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 CAMK4Q16566 473 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
SCN1B-208ENST00000640135 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 BICD1Q96G01 975 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 H7C1D1 291 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
SCN1B-208ENST00000640135 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
SCN1B-208ENST00000640135 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms