RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 EHHADHQ08426 723 aa9.38□□□□□ -0.91
CCDC7-216ENST00000640058 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
CCDC7-216ENST00000640058 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
CCDC7-216ENST00000640058 BRPF3Q9ULD4 1205 aa9.38□□□□□ -0.91
CCDC7-216ENST00000640058 PTPRAP18433 802 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 EPHA1P21709 976 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
CCDC7-216ENST00000640058 PDE4CQ08493 712 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 DZANK1Q9NVP4 752 aa9.37□□□□□ -0.91
CCDC7-216ENST00000640058 POLR3DP05423 398 aaPredicted RBP9.36□□□□□ -0.91
CCDC7-216ENST00000640058 ECM1Q16610 540 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
CCDC7-216ENST00000640058 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 GALNT11Q8NCW6 608 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 PMEPA1Q969W9 287 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 MUC3BQ9H195 1237 aa9.36□□□□□ -0.91
CCDC7-216ENST00000640058 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 NFKBIEO00221 500 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 ALX3O95076 343 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 NOS3P29474 1203 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 ARHGAP4P98171 946 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
CCDC7-216ENST00000640058 PDE2AO00408 941 aaPredicted RBP9.34□□□□□ -0.91
CCDC7-216ENST00000640058 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
CCDC7-216ENST00000640058 TP53INP1Q96A56 240 aa9.34□□□□□ -0.91
CCDC7-216ENST00000640058 OSMRQ99650 979 aa9.34□□□□□ -0.91
CCDC7-216ENST00000640058 ZKSCAN3Q9BRR0 538 aa9.34□□□□□ -0.91
CCDC7-216ENST00000640058 SRA1Q9HD15 236 aaKnown RBP9.34□□□□□ -0.91
CCDC7-216ENST00000640058 NDUFB5O43674 189 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
CCDC7-216ENST00000640058 NKAPLQ5M9Q1 402 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
CCDC7-216ENST00000640058 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 AGGF1Q8N302 714 aaeCLIP9.33□□□□□ -0.92
CCDC7-216ENST00000640058 ADAM19Q9H013 955 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
CCDC7-216ENST00000640058 AMOTL2Q9Y2J4 779 aa9.33□□□□□ -0.92
CCDC7-216ENST00000640058 FSCN2O14926 492 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 EDN3P14138 238 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 ITGB7P26010 798 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 MEGF10Q96KG7 1140 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 KCNK4Q9NYG8 393 aa9.32□□□□□ -0.92
CCDC7-216ENST00000640058 DYRK3O43781 588 aa9.31□□□□□ -0.92
CCDC7-216ENST00000640058 WISP1O95388 367 aa9.31□□□□□ -0.92
CCDC7-216ENST00000640058 CABP4P57796 275 aa9.31□□□□□ -0.92
CCDC7-216ENST00000640058 SLC7A3Q8WY07 619 aa9.31□□□□□ -0.92
CCDC7-216ENST00000640058 AKTIPQ9H8T0 292 aa9.31□□□□□ -0.92
CCDC7-216ENST00000640058 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-216ENST00000640058 H3BRJ5 948 aa9.3□□□□□ -0.92
CCDC7-216ENST00000640058 DDX3YO15523 660 aaKnown RBP9.3□□□□□ -0.92
CCDC7-216ENST00000640058 CD68P34810 354 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-216ENST00000640058 TMEM102Q8N9M5 508 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-216ENST00000640058 TMC1Q8TDI8 760 aa9.3□□□□□ -0.92
CCDC7-216ENST00000640058 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
CCDC7-216ENST00000640058 NXPE3Q969Y0 559 aa9.3□□□□□ -0.92
CCDC7-216ENST00000640058 SSBP4Q9BWG4 385 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-216ENST00000640058 ORC1Q13415 861 aa9.29□□□□□ -0.92
CCDC7-216ENST00000640058 PEAR1Q5VY43 1037 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-216ENST00000640058 USPL1Q5W0Q7 1092 aa9.29□□□□□ -0.92
CCDC7-216ENST00000640058 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
CCDC7-216ENST00000640058 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
CCDC7-216ENST00000640058 KLHDC7BQ96G42 594 aa9.29□□□□□ -0.92
CCDC7-216ENST00000640058 BIN2Q9UBW5 565 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-216ENST00000640058 SOWAHDA6NJG2 315 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 METTL12A8MUP2 240 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 HGSNATQ68CP4 663 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 SOX13Q9UN79 622 aa9.28□□□□□ -0.92
CCDC7-216ENST00000640058 TM4SF5O14894 197 aa9.27□□□□□ -0.93
CCDC7-216ENST00000640058 BRD1O95696 1058 aa9.27□□□□□ -0.93
CCDC7-216ENST00000640058 GLB1P16278 677 aa9.27□□□□□ -0.93
CCDC7-216ENST00000640058 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
CCDC7-216ENST00000640058 KLHL23Q8NBE8 558 aa9.27□□□□□ -0.93
CCDC7-216ENST00000640058 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
CCDC7-216ENST00000640058 FAM129BQ96TA1 746 aa9.27□□□□□ -0.93
CCDC7-216ENST00000640058 GPR182O15218 404 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 ADAM11O75078 769 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 NLRP12P59046 1061 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 PDE3BQ13370 1112 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 TMEM130Q8N3G9 435 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 BSNDQ8WZ55 320 aa9.26□□□□□ -0.93
CCDC7-216ENST00000640058 LOC100996750A0A140TA64 210 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 GALNT12Q8IXK2 581 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 KRTAP4-6Q9BYQ5 205 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 NIF3L1Q9GZT8 377 aa9.25□□□□□ -0.93
CCDC7-216ENST00000640058 A0A1W2PP55 124 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 IKBKEQ14164 716 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 PRSS36Q5K4E3 855 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 VN1R5Q7Z5H4 357 aa9.24□□□□□ -0.93
CCDC7-216ENST00000640058 BHLHE41Q9C0J9 482 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms