RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 GSX2Q9BZM3 304 aa8.83□□□□□ -1
ATM-229ENST00000639953 CFAP65Q6ZU64 1925 aaKnown RBP8.83□□□□□ -1
ATM-229ENST00000639953 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
ATM-229ENST00000639953 ANKRD50Q9ULJ7 1429 aa8.82□□□□□ -1
ATM-229ENST00000639953 ABCC3O15438 1527 aa8.82□□□□□ -1
ATM-229ENST00000639953 PRDM15P57071 1507 aaPredicted RBP8.82□□□□□ -1
ATM-229ENST00000639953 USP17L15C9J2P7 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L10C9JJH3 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L13C9JLJ4 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L12C9JPN9 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L11C9JVI0 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L21D6R901 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L18D6R9N7 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L22D6RA61 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L17D6RBQ6 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L19D6RCP7 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L20D6RJB6 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 NID1P14543 1247 aa8.82□□□□□ -1
ATM-229ENST00000639953 USP17L24Q0WX57 530 aa8.82□□□□□ -1
ATM-229ENST00000639953 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
ATM-229ENST00000639953 ROCK1Q13464 1354 aa8.82□□□□□ -1
ATM-229ENST00000639953 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
ATM-229ENST00000639953 PREX1Q8TCU6 1659 aa8.81□□□□□ -1
ATM-229ENST00000639953 CAMSAP1Q5T5Y3 1602 aa8.81□□□□□ -1
ATM-229ENST00000639953 ITGB7P26010 798 aa8.81□□□□□ -1
ATM-229ENST00000639953 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
ATM-229ENST00000639953 GRIK4Q16099 956 aa8.81□□□□□ -1
ATM-229ENST00000639953 RTN1Q16799 776 aa8.81□□□□□ -1
ATM-229ENST00000639953 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
ATM-229ENST00000639953 ARXQ96QS3 562 aa8.81□□□□□ -1
ATM-229ENST00000639953 UBE2OQ9C0C9 1292 aaKnown RBP8.81□□□□□ -1
ATM-229ENST00000639953 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
ATM-229ENST00000639953 KLK14Q9P0G3 267 aa8.81□□□□□ -1
ATM-229ENST00000639953 LMTK3Q96Q04 1460 aa8.81□□□□□ -1
ATM-229ENST00000639953 FAM196BA6NMK8 535 aa8.8□□□□□ -1
ATM-229ENST00000639953 IGFBP4P22692 258 aa8.8□□□□□ -1
ATM-229ENST00000639953 HSPA2P54652 639 aa8.8□□□□□ -1
ATM-229ENST00000639953 TRIM28Q13263 835 aaKnown RBP8.8□□□□□ -1
ATM-229ENST00000639953 XP32Q5T750 250 aa8.8□□□□□ -1
ATM-229ENST00000639953 NUDT8Q8WV74 236 aa8.8□□□□□ -1
ATM-229ENST00000639953 SEMA6BQ9H3T3 888 aa8.8□□□□□ -1
ATM-229ENST00000639953 GCC2Q8IWJ2 1684 aa8.8□□□□□ -1
ATM-229ENST00000639953 NAIPQ13075 1403 aa8.8□□□□□ -1
ATM-229ENST00000639953 UNC13BO14795 1591 aa8.79□□□□□ -1
ATM-229ENST00000639953 VWDEQ8N2E2 1590 aa8.79□□□□□ -1
ATM-229ENST00000639953 SPDYE3A6NKU9 549 aa8.79□□□□□ -1
ATM-229ENST00000639953 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
ATM-229ENST00000639953 SIN3AQ96ST3 1273 aa8.79□□□□□ -1
ATM-229ENST00000639953 MYO3AQ8NEV4 1616 aa8.79□□□□□ -1
ATM-229ENST00000639953 FAM135AQ9P2D6 1515 aa8.79□□□□□ -1
ATM-229ENST00000639953 SETD5Q9C0A6 1442 aa8.79□□□□□ -1
ATM-229ENST00000639953 PZPP20742 1482 aa8.78□□□□□ -1
ATM-229ENST00000639953 KANK1Q14678 1352 aa8.78□□□□□ -1
ATM-229ENST00000639953 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
ATM-229ENST00000639953 CCINQ13939 588 aa8.78□□□□□ -1
ATM-229ENST00000639953 HIF1AQ16665 826 aa8.78□□□□□ -1
ATM-229ENST00000639953 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
ATM-229ENST00000639953 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
ATM-229ENST00000639953 SLC6A14Q9UN76 642 aa8.78□□□□□ -1
ATM-229ENST00000639953 SETD1BQ9UPS6 1966 aaKnown RBP8.78□□□□□ -1
ATM-229ENST00000639953 LILRB5O75023 590 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 APBA3O96018 575 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 DGKZQ13574 1117 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 IER5Q5VY09 327 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.77□□□□□ -1.01
ATM-229ENST00000639953 NPATQ14207 1427 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 UHRF1BP1Q6BDS2 1440 aa8.77□□□□□ -1.01
ATM-229ENST00000639953 LMTK2Q8IWU2 1503 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 NFKB1P19838 968 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 RFX1P22670 979 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 WEE1P30291 646 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 INPP5BP32019 993 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 IDH3AP50213 366 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 PNMA5Q96PV4 448 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 QTRT2Q9H974 415 aaKnown RBP8.76□□□□□ -1.01
ATM-229ENST00000639953 JPH1Q9HDC5 661 aaPredicted RBP8.76□□□□□ -1.01
ATM-229ENST00000639953 HFM1A2PYH4 1435 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
ATM-229ENST00000639953 EFCAB6Q5THR3 1501 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 TNRQ92752 1358 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 SPATA31D1Q6ZQQ2 1576 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 TARSP26639 723 aaKnown RBP8.75□□□□□ -1.01
ATM-229ENST00000639953 PSAPL1Q6NUJ1 521 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 KRT25Q7Z3Z0 450 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 TPSG1Q9NRR2 321 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 ZFATQ9P243 1243 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 E9PCH4 1651 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 TET3O43151 1660 aa8.75□□□□□ -1.01
ATM-229ENST00000639953 ZNF142P52746 1687 aaPredicted RBP8.75□□□□□ -1.01
ATM-229ENST00000639953 NUP155O75694 1391 aa8.74□□□□□ -1.01
ATM-229ENST00000639953 CEP170BQ9Y4F5 1589 aaPredicted RBP8.74□□□□□ -1.01
ATM-229ENST00000639953 ARHGAP31Q2M1Z3 1444 aa8.74□□□□□ -1.01
ATM-229ENST00000639953 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
ATM-229ENST00000639953 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
ATM-229ENST00000639953 Q8N3U1 123 aa8.74□□□□□ -1.01
ATM-229ENST00000639953 FAM200AQ8TCP9 573 aa8.74□□□□□ -1.01
ATM-229ENST00000639953 STRCQ7RTU9 1775 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms