RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 LRP8Q14114 963 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.09□□□□□ -1.43
ATM-228ENST00000639240 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 KANSL3Q9P2N6 904 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 DDX3YO15523 660 aaKnown RBP6.08□□□□□ -1.44
ATM-228ENST00000639240 ADAM11O75078 769 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 PDE4CQ08493 712 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 TTC39BQ5VTQ0 682 aaPredicted RBP6.08□□□□□ -1.44
ATM-228ENST00000639240 C1orf127Q8N9H9 656 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 HHIPQ96QV1 700 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 CARD10Q9BWT7 1032 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 RBSNQ9H1K0 784 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 SALL4Q9UJQ4 1053 aa6.08□□□□□ -1.44
ATM-228ENST00000639240 MTMR3Q13615 1198 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 KIAA1211Q6ZU35 1233 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 ARMC10Q8N2F6 343 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 ABTB2Q8N961 1025 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 GTF3C2Q8WUA4 911 aaPredicted RBP6.07□□□□□ -1.44
ATM-228ENST00000639240 EDEM1Q92611 657 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 CHRDQ9H2X0 955 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 SRA1Q9HD15 236 aaKnown RBP6.07□□□□□ -1.44
ATM-228ENST00000639240 FAM13BQ9NYF5 915 aa6.07□□□□□ -1.44
ATM-228ENST00000639240 FNDC3AQ9Y2H6 1198 aaKnown RBP6.07□□□□□ -1.44
ATM-228ENST00000639240 PDGFAP04085 211 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 CDC27P30260 824 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 CD68P34810 354 aaPredicted RBP6.06□□□□□ -1.44
ATM-228ENST00000639240 HGSNATQ68CP4 663 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 PDE12Q6L8Q7 609 aaKnown RBP6.06□□□□□ -1.44
ATM-228ENST00000639240 B4GALNT3Q6L9W6 998 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 XKR5Q6UX68 686 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 MAP4K3Q8IVH8 894 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 HELQQ8TDG4 1101 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 FOXD4L4Q8WXT5 416 aaPredicted RBP6.06□□□□□ -1.44
ATM-228ENST00000639240 KLHDC7BQ96G42 594 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 ADAM19Q9H013 955 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 RNF112Q9ULX5 631 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 MTMR7Q9Y216 660 aa6.06□□□□□ -1.44
ATM-228ENST00000639240 FSCN2O14926 492 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 MED26O95402 600 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 FSTP19883 344 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 MPSTP25325 297 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 CACTIN-AS1Q8N1I8 211 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 SPACA7Q96KW9 195 aa6.05□□□□□ -1.44
ATM-228ENST00000639240 SMNDC1O75940 238 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-228ENST00000639240 ABL1P00519 1130 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 GLB1P16278 677 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 EIF1AXP47813 144 aaKnown RBP6.04□□□□□ -1.44
ATM-228ENST00000639240 DNM1Q05193 864 aaKnown RBP6.04□□□□□ -1.44
ATM-228ENST00000639240 ZNF438Q7Z4V0 828 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 NCAPG2Q86XI2 1143 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 UBASH3BQ8TF42 649 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 MUC3BQ9H195 1237 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
ATM-228ENST00000639240 NOM1Q5C9Z4 860 aaKnown RBP6.03□□□□□ -1.44
ATM-228ENST00000639240 ACAD11Q709F0 780 aa6.03□□□□□ -1.44
ATM-228ENST00000639240 ANO2Q9NQ90 1003 aa6.03□□□□□ -1.44
ATM-228ENST00000639240 FAM46AQ96IP4 442 aaKnown RBP6.02□□□□□ -1.45
ATM-228ENST00000639240 POLIQ9UNA4 740 aa6.02□□□□□ -1.45
ATM-228ENST00000639240 RAXQ9Y2V3 346 aa6.02□□□□□ -1.45
ATM-228ENST00000639240 EREGO14944 169 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 NPR3P17342 541 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 PTPRAP18433 802 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 CES1P23141 567 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 MZF1P28698 734 aaPredicted RBP6.01□□□□□ -1.45
ATM-228ENST00000639240 SERPINB4P48594 390 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 FKBP4Q02790 459 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATM-228ENST00000639240 ZNF211Q13398 564 aaPredicted RBP6.01□□□□□ -1.45
ATM-228ENST00000639240 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 NBPF11Q86T75 865 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 KLHL23Q8NBE8 558 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
ATM-228ENST00000639240 FZD6O60353 706 aa6□□□□□ -1.45
ATM-228ENST00000639240 SSTR4P31391 388 aa6□□□□□ -1.45
ATM-228ENST00000639240 CD97P48960 835 aa6□□□□□ -1.45
ATM-228ENST00000639240 AAMPQ13685 434 aa6□□□□□ -1.45
ATM-228ENST00000639240 DUOXA2Q1HG44 320 aa6□□□□□ -1.45
ATM-228ENST00000639240 NXPE3Q969Y0 559 aa6□□□□□ -1.45
ATM-228ENST00000639240 SEC31BQ9NQW1 1179 aa6□□□□□ -1.45
ATM-228ENST00000639240 FOXD3Q9UJU5 478 aaPredicted RBP6□□□□□ -1.45
ATM-228ENST00000639240 HMX2A2RU54 273 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 H3BRJ5 948 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 PDE2AO00408 941 aaPredicted RBP5.99□□□□□ -1.45
ATM-228ENST00000639240 SOX1O00570 391 aaPredicted RBP5.99□□□□□ -1.45
ATM-228ENST00000639240 ADAMTS4O75173 837 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 TNFRSF21O75509 655 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 FAM13AO94988 1023 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 BRD1O95696 1058 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 TGFB1P01137 390 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 IGLV1-40P01703 118 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 SF3B2Q13435 895 aaKnown RBP5.99□□□□□ -1.45
ATM-228ENST00000639240 PEAR1Q5VY43 1037 aaPredicted RBP5.99□□□□□ -1.45
ATM-228ENST00000639240 VN1R5Q7Z5H4 357 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 ZDHHC13Q8IUH4 622 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 TRIM42Q8IWZ5 723 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 ZKSCAN3Q9BRR0 538 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 C7orf69Q9H7B7 122 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 LATS2Q9NRM7 1088 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 CCDC87Q9NVE4 849 aa5.99□□□□□ -1.45
ATM-228ENST00000639240 STOML1Q9UBI4 398 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms