RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ECE2O60344 883 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 HSP90B1P14625 803 aaKnown RBP7.13□□□□□ -1.27
PDE4D-229ENST00000638939 GPSM2P81274 684 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDE4D-229ENST00000638939 KRT26Q7Z3Y9 468 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 IFNL1Q8IU54 200 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 KRI1Q8N9T8 703 aaKnown RBP7.13□□□□□ -1.27
PDE4D-229ENST00000638939 FAM89AQ96GI7 184 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 ZNF408Q9H9D4 720 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 DBNDD1Q9H9R9 158 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 POLLQ9UGP5 575 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 TSKSQ9UJT2 592 aa7.13□□□□□ -1.27
PDE4D-229ENST00000638939 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 IRS4O14654 1257 aaPredicted RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 EGFRP00533 1210 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 ZNF853P0CG23 659 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 HUNKP57058 714 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 MLLT1Q03111 559 aaPredicted RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 MKRN3Q13064 507 aaKnown RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 GPIHBP1Q8IV16 184 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 CCDC146Q8IYE0 955 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 ZBTB38Q8NAP3 1195 aaPredicted RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 TBC1D16Q8TBP0 767 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 MCOLN1Q9GZU1 580 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 GBA2Q9HCG7 927 aaPredicted RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 IFT57Q9NWB7 429 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 GGA3Q9NZ52 723 aa7.12□□□□□ -1.27
PDE4D-229ENST00000638939 NSFL1CQ9UNZ2 370 aaKnown RBP7.12□□□□□ -1.27
PDE4D-229ENST00000638939 COL1A1P02452 1464 aaPredicted RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 MED23Q9ULK4 1368 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 XDHP47989 1333 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 CCDC85CA6NKD9 419 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 ADM5C9JUS6 153 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 ATP5J2-PTCD1G3V325 749 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 C6orf229H3BNL8 230 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 SLC10A3P09131 477 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 ZNF280AP59817 542 aaPredicted RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 RPS8P62241 208 aaKnown RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 CALD1Q05682 793 aaKnown RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 TBC1D10BQ4KMP7 808 aaPredicted RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 DUSP27Q5VZP5 1158 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 RGMBQ6NW40 437 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 SULF1Q8IWU6 871 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 C2orf69Q8N8R5 385 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 CCDC191Q8NCU4 936 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 CCDC102AQ96A19 550 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 DCPSQ96C86 337 aaKnown RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 MBIPQ9NS73 344 aa7.11□□□□□ -1.27
PDE4D-229ENST00000638939 LAS1LQ9Y4W2 734 aaKnown RBP7.11□□□□□ -1.27
PDE4D-229ENST00000638939 SPDYE16A6NNV3 312 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-229ENST00000638939 RIMBP2O15034 1052 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 PDE8AO60658 829 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 PPP1R37O75864 691 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 UFL1O94874 794 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 PCCAP05165 728 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-229ENST00000638939 FKBP1BP68106 108 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 CCDC152Q4G0S7 254 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 RSBN1LQ6PCB5 846 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-229ENST00000638939 AGBL3Q8NEM8 1001 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 KIF12Q96FN5 646 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 CHMP4AQ9BY43 222 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 ZC3H12CQ9C0D7 883 aaKnown RBP7.1□□□□□ -1.27
PDE4D-229ENST00000638939 GGA1Q9UJY5 639 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 ADAMTS8Q9UP79 889 aa7.1□□□□□ -1.27
PDE4D-229ENST00000638939 MAP3K13O43283 966 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 ZNF157P51786 506 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-229ENST00000638939 CTSWP56202 376 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 GNAI1P63096 354 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 CAMK2BQ13554 666 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 DGKZQ13574 1117 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 DOK7Q18PE1 504 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-229ENST00000638939 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 RASAL3Q86YV0 1011 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 PIP4P2Q8N4L2 257 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 ZIC5Q96T25 663 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 GMLQ99445 158 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 CRISPLD2Q9H0B8 497 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 KCNQ5Q9NR82 932 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 CWC25Q9NXE8 425 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-229ENST00000638939 ANKIB1Q9P2G1 1089 aa7.09□□□□□ -1.27
PDE4D-229ENST00000638939 ASTN2O75129 1339 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 MYO3BQ8WXR4 1341 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 DDX58O95786 925 aaKnown RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 MMP14P50281 582 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 KIF23Q02241 960 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 DLK2Q6UY11 383 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 ANKRD18AQ8IVF6 992 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 ZNF428Q96B54 188 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 CDC5LQ99459 802 aaKnown RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 MYD88Q99836 296 aa7.08□□□□□ -1.28
PDE4D-229ENST00000638939 METTL22Q9BUU2 404 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-229ENST00000638939 PHAXQ9H814 394 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms