RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
LINC00598-216ENST00000638163 PAG1Q9NWQ8 432 aa12.5□□□□□ -0.41
LINC00598-216ENST00000638163 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
LINC00598-216ENST00000638163 DUOX1Q9NRD9 1551 aa12.5□□□□□ -0.41
LINC00598-216ENST00000638163 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 MCCP23508 829 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 CHMLP26374 656 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 VPS37DQ86XT2 251 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 KBTBD3Q8NAB2 608 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
LINC00598-216ENST00000638163 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
LINC00598-216ENST00000638163 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
LINC00598-216ENST00000638163 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
LINC00598-216ENST00000638163 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
LINC00598-216ENST00000638163 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 DENND2AQ9ULE3 1009 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
LINC00598-216ENST00000638163 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
LINC00598-216ENST00000638163 TSHZ3Q63HK5 1081 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 TBC1D32Q96NH3 1257 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 SNRKQ9NRH2 765 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 RBM19Q9Y4C8 960 aaKnown RBP12.47□□□□□ -0.41
LINC00598-216ENST00000638163 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
LINC00598-216ENST00000638163 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 PTGER2P43116 358 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 ANAPC15P60006 121 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 TGFB2P61812 414 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 EYA3Q99504 573 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
LINC00598-216ENST00000638163 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
LINC00598-216ENST00000638163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
LINC00598-216ENST00000638163 SGSM2O43147 1006 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 HIBADHP31937 336 aaKnown RBP12.45□□□□□ -0.42
LINC00598-216ENST00000638163 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 CERS3Q8IU89 383 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 SPATA5Q8NB90 893 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
LINC00598-216ENST00000638163 A0A1B0GUL6 1792 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 GOLIM4O00461 696 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 TAF5LO75529 589 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 ADORA1P30542 326 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00598-216ENST00000638163 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
LINC00598-216ENST00000638163 FBXO33Q7Z6M2 555 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
LINC00598-216ENST00000638163 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
LINC00598-216ENST00000638163 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
LINC00598-216ENST00000638163 MCAMP43121 646 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 PHKA1P46020 1223 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 UBE3CQ15386 1083 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 WASHC4Q2M389 1173 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
LINC00598-216ENST00000638163 WDR66Q8TBY9 1149 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
LINC00598-216ENST00000638163 SALL1Q9NSC2 1324 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-216ENST00000638163 UFL1O94874 794 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 MCMDC2Q4G0Z9 681 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 DPP8Q6V1X1 898 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-216ENST00000638163 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 MPNDQ8N594 471 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 TBC1D22AQ8WUA7 517 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 APPBP2Q92624 585 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 FAM84BQ96KN1 310 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-216ENST00000638163 USP26Q9BXU7 913 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
LINC00598-216ENST00000638163 SUGT1Q9Y2Z0 365 aa12.42□□□□□ -0.42
LINC00598-216ENST00000638163 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-216ENST00000638163 KIF13BQ9NQT8 1826 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 BECN1Q14457 450 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 ZMYM1Q5SVZ6 1142 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
LINC00598-216ENST00000638163 CWC27Q6UX04 472 aaKnown RBP12.41□□□□□ -0.42
LINC00598-216ENST00000638163 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 ZNF622Q969S3 477 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00598-216ENST00000638163 COA1Q9GZY4 146 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 DLEC1Q9Y238 1755 aa12.41□□□□□ -0.42
LINC00598-216ENST00000638163 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
LINC00598-216ENST00000638163 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms