RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 IRS2Q9Y4H2 1338 aa15.66■□□□□ 0.1
CLN6-225ENST00000638144 PTPN12Q05209 780 aaKnown RBP15.65■□□□□ 0.1
CLN6-225ENST00000638144 METTL24Q5JXM2 366 aa15.65■□□□□ 0.1
CLN6-225ENST00000638144 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
CLN6-225ENST00000638144 GPRC5DQ9NZD1 345 aa15.65■□□□□ 0.1
CLN6-225ENST00000638144 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
CLN6-225ENST00000638144 SMC1BQ8NDV3 1235 aa15.64■□□□□ 0.09
CLN6-225ENST00000638144 GNAI2P04899 355 aa15.63■□□□□ 0.09
CLN6-225ENST00000638144 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
CLN6-225ENST00000638144 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
CLN6-225ENST00000638144 JAG2Q9Y219 1238 aa15.63■□□□□ 0.09
CLN6-225ENST00000638144 MROH5Q6ZUA9 1318 aa15.63■□□□□ 0.09
CLN6-225ENST00000638144 EYA2O00167 538 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 SRGAP3O43295 1099 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 GYG1P46976 350 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 HTRA3P83110 453 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 C20orf194Q5TEA3 1177 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 VGLL2Q8N8G2 317 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 COA1Q9GZY4 146 aa15.62■□□□□ 0.09
CLN6-225ENST00000638144 CNOT7Q9UIV1 285 aaKnown RBP15.62■□□□□ 0.09
CLN6-225ENST00000638144 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 USP17L3A6NCW0 530 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 USP17L4A6NCW7 530 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 EGFRP00533 1210 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 VIL1P09327 827 aaKnown RBP15.61■□□□□ 0.09
CLN6-225ENST00000638144 HSPA6P17066 643 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 FSTL1Q12841 308 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 MAP1SQ66K74 1059 aaPredicted RBP15.61■□□□□ 0.09
CLN6-225ENST00000638144 USP17L1Q7RTZ2 530 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 SAMD7Q7Z3H4 446 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 HDAC5Q9UQL6 1122 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
CLN6-225ENST00000638144 GTF2IP78347 998 aa15.6■□□□□ 0.09
CLN6-225ENST00000638144 TBC1D10BQ4KMP7 808 aaPredicted RBP15.6■□□□□ 0.09
CLN6-225ENST00000638144 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
CLN6-225ENST00000638144 RSBN1LQ6PCB5 846 aaPredicted RBP15.6■□□□□ 0.09
CLN6-225ENST00000638144 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
CLN6-225ENST00000638144 ADARB2Q9NS39 739 aaKnown RBP15.6■□□□□ 0.09
CLN6-225ENST00000638144 IQSEC3Q9UPP2 1182 aaPredicted RBP15.6■□□□□ 0.09
CLN6-225ENST00000638144 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
CLN6-225ENST00000638144 PDE8BO95263 885 aa15.59■□□□□ 0.09
CLN6-225ENST00000638144 HIRAP54198 1017 aaPredicted RBP15.59■□□□□ 0.09
CLN6-225ENST00000638144 MTX1Q13505 466 aa15.59■□□□□ 0.09
CLN6-225ENST00000638144 UBE4AQ14139 1066 aa15.59■□□□□ 0.09
CLN6-225ENST00000638144 DACT2Q5SW24 774 aa15.59■□□□□ 0.09
CLN6-225ENST00000638144 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
CLN6-225ENST00000638144 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
CLN6-225ENST00000638144 H7C1D1 291 aa15.58■□□□□ 0.08
CLN6-225ENST00000638144 FMR1Q06787 632 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLN6-225ENST00000638144 TTLL5Q6EMB2 1281 aa15.58■□□□□ 0.08
CLN6-225ENST00000638144 DPF2Q92785 391 aa15.58■□□□□ 0.08
CLN6-225ENST00000638144 FAM84BQ96KN1 310 aaPredicted RBP15.58■□□□□ 0.08
CLN6-225ENST00000638144 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
CLN6-225ENST00000638144 MYH13Q9UKX3 1938 aa15.58■□□□□ 0.08
CLN6-225ENST00000638144 POLR2AP24928 1970 aaKnown RBP15.58■□□□□ 0.08
CLN6-225ENST00000638144 RPS12P25398 132 aaKnown RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 PUM3Q15397 648 aaKnown RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 GMLQ99445 158 aa15.57■□□□□ 0.08
CLN6-225ENST00000638144 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 ASTN2O75129 1339 aaPredicted RBP15.57■□□□□ 0.08
CLN6-225ENST00000638144 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
CLN6-225ENST00000638144 CIAO1O76071 339 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 IL1R1P14778 569 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 FGFR2P21802 821 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
CLN6-225ENST00000638144 BCAMP50895 628 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 ATP2B3Q16720 1220 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 KIF4BQ2VIQ3 1234 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 KIAA0825Q8IV33 1275 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 CERS5Q8N5B7 392 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 AGBL3Q8NEM8 1001 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 CEP126Q9P2H0 1117 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 ZNF609O15014 1411 aa15.56■□□□□ 0.08
CLN6-225ENST00000638144 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
CLN6-225ENST00000638144 TRAF5O00463 557 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 USP17L8P0C7I0 530 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 MS4A1P11836 297 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 SLC5A1P13866 664 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 IL15P40933 162 aaPredicted RBP15.55■□□□□ 0.08
CLN6-225ENST00000638144 TFCP2Q12800 502 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 CHAF1AQ13111 956 aaPredicted RBP15.55■□□□□ 0.08
CLN6-225ENST00000638144 DLK2Q6UY11 383 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 CNTROBQ8N137 903 aa15.55■□□□□ 0.08
CLN6-225ENST00000638144 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
CLN6-225ENST00000638144 ITGBL1O95965 494 aaPredicted RBP15.54■□□□□ 0.08
CLN6-225ENST00000638144 IFIT1P09914 478 aaKnown RBP15.54■□□□□ 0.08
CLN6-225ENST00000638144 ADORA1P30542 326 aa15.54■□□□□ 0.08
CLN6-225ENST00000638144 ATP8B2P98198 1209 aa15.54■□□□□ 0.08
CLN6-225ENST00000638144 CEP85Q6P2H3 762 aa15.54■□□□□ 0.08
CLN6-225ENST00000638144 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
CLN6-225ENST00000638144 TDRD7Q8NHU6 1098 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms