RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 ZNF396Q96N95 335 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 E7EWF7 191 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 KINO60870 393 aaKnown RBP11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 FAM160A1Q05DH4 1040 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
SMARCA2-265ENST00000638139 MEGF6O75095 1541 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 USP27XA6NNY8 438 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 FOXO4P98177 505 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 CCDC112Q8NEF3 446 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 BECN2A8MW95 431 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 NEMFO60524 1076 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 TIMM10P62072 90 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 ANO10Q9NW15 660 aa11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
SMARCA2-265ENST00000638139 HSPD1P10809 573 aaKnown RBP11.77□□□□□ -0.52
SMARCA2-265ENST00000638139 ME1P48163 572 aa11.77□□□□□ -0.52
SMARCA2-265ENST00000638139 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.52
SMARCA2-265ENST00000638139 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
SMARCA2-265ENST00000638139 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
SMARCA2-265ENST00000638139 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
SMARCA2-265ENST00000638139 MAST3O60307 1309 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 H7C1W4 665 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 SKILP12757 684 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 CCZ1BP86790 482 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 CCZ1P86791 482 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 FILIP1Q7Z7B0 1213 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 FEZ1Q99689 392 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 GTPBP4Q9BZE4 634 aaKnown RBP11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 ZHX1Q9UKY1 873 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 ABCC6O95255 1503 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 CEP57L1Q8IYX8 460 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 FMR1NBQ8N0W7 255 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.532e-8■■■■□ 21
SMARCA2-265ENST00000638139 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
SMARCA2-265ENST00000638139 CYP27B1O15528 508 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 DCAF5Q96JK2 942 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 GLI3P10071 1580 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 M0R2C6 588 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 PTPN14Q15678 1187 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 TICAM2Q86XR7 235 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 RTEL1Q9NZ71 1219 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 CGNQ9P2M7 1197 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 ZNF142P52746 1687 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 TJP1Q07157 1748 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 NWD2Q9ULI1 1742 aa11.75□□□□□ -0.53
SMARCA2-265ENST00000638139 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 ADALQ6DHV7 355 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 OGFRQ9NZT2 677 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 COL18A1P39060 1754 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 TRMT1Q9NXH9 659 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 MST1RQ04912 1400 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
SMARCA2-265ENST00000638139 A0A1W2PQ27 194 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 A0A1W2PQ64 194 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 A0A1W2PQD8 194 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 NBPF26B4DH59 902 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 NDUFA8P51970 172 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 EVCP57679 992 aa11.73□□□□□ -0.53
SMARCA2-265ENST00000638139 NBPF14Q5TI25 921 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms