RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	MEIS3	Q99687	375 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	DNAJC25	Q9H1X3	360 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	MIS18A	Q9NYP9	233 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	JRKL	Q9Y4A0	524 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	KDM6A	O15550	1401 aa	Predicted RBP	18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	GOLGA6L4	A6NEF3	574 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	MAGEA9	P43362	315 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	CCDC158	Q5M9N0	1113 aa		18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
CLCN2-222	ENST00000638134	TNS2	Q63HR2	1409 aa		18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	ARID5B	Q14865	1188 aa		18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	TTC31	Q49AM3	519 aa	Predicted RBP	18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	MARCH10	Q8NA82	808 aa	Predicted RBP	18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	LRRCC1	Q9C099	1032 aa		18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	IMPACT	Q9P2X3	320 aa		18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	EXOC6B	Q9Y2D4	811 aa		18.27	■□□□□ 0.52
CLCN2-222	ENST00000638134	RNMT	O43148	476 aa	Known RBP	18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	SMC1A	Q14683	1233 aa	Known RBP	18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	SEPT12	Q8IYM1	358 aa		18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	PHLPP2	Q6ZVD8	1323 aa		18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	THSD7A	Q9UPZ6	1657 aa		18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	ACTN2	P35609	894 aa		18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	GYS2	P54840	703 aa		18.26	■□□□□ 0.51
CLCN2-222	ENST00000638134	VPS37C	A5D8V6	355 aa	Predicted RBP	18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	EFCAB8	A8MWE9	144 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	REXO1L1P	Q8IX06	675 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	PPP1R13B	Q96KQ4	1090 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	TMX1	Q9H3N1	280 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	HYPK	Q9NX55	129 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	CCP110	O43303	1012 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	PDC	P20941	246 aa		18.25	■□□□□ 0.51
CLCN2-222	ENST00000638134	ONECUT3	O60422	494 aa	Predicted RBP	18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	RPS6KA5	O75582	802 aa		18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	TBC1D8	O95759	1140 aa		18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	VPS53	Q5VIR6	699 aa		18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	CHMP4C	Q96CF2	233 aa		18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	CEMIP	Q8WUJ3	1361 aa		18.24	■□□□□ 0.51
CLCN2-222	ENST00000638134	APP	P05067	770 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	ATP2B1	P20020	1258 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	E4F1	Q66K89	784 aa	Predicted RBP	18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	CCDC83	Q8IWF9	413 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	CCDC150	Q8NCX0	1101 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	LRRN4CL	Q8ND94	238 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	TADA3	O75528	432 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	KRT24	Q2M2I5	525 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	SPATA32	Q96LK8	384 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	CHMP3	Q9Y3E7	222 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	TOGARAM1	Q9Y4F4	1720 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	SCN11A	Q9UI33	1791 aa		18.23	■□□□□ 0.51
CLCN2-222	ENST00000638134	CTAGE5	O15320	804 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	SGSM2	O43147	1006 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	NRDC	O43847	1150 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	RXRB	P28702	533 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	STX1A	Q16623	288 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	TSHZ3	Q63HK5	1081 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	LEKR1	Q6ZMV7	388 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	MNS1	Q8NEH6	495 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	ACSBG1	Q96GR2	724 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	DEF6	Q9H4E7	631 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	USP16	Q9Y5T5	823 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	BRWD3	Q6RI45	1802 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	SUGP1	Q8IWZ8	645 aa	Known RBP	18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	DCAF5	Q96JK2	942 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	ADAM21	Q9UKJ8	722 aa		18.22	■□□□□ 0.51
CLCN2-222	ENST00000638134	LARGE1	O95461	756 aa		18.21	■□□□□ 0.51
CLCN2-222	ENST00000638134	ETF1	P62495	437 aa	Known RBP	18.21	■□□□□ 0.51
CLCN2-222	ENST00000638134	PPM1E	Q8WY54	764 aa		18.21	■□□□□ 0.51
CLCN2-222	ENST00000638134	TM6SF1	Q9BZW5	370 aa		18.21	■□□□□ 0.51
CLCN2-222	ENST00000638134	TTC41P	Q6P2S7	1318 aa		18.21	■□□□□ 0.51
CLCN2-222	ENST00000638134	SASH3	O75995	380 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	NKX1-1	Q15270	411 aa	Predicted RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	SWT1	Q5T5J6	900 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	LARP1B	Q659C4	914 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	LEO1	Q8WVC0	666 aa	Predicted RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	LSG1	Q9H089	658 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	ADAMTS7	Q9UKP4	1686 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	KCNQ3	O43525	872 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	NR1I2	O75469	434 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	CCT4	P50991	539 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	TEF	Q10587	303 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	GPR161	Q8N6U8	529 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	IL25	Q9H293	177 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	ZCCHC17	Q9NP64	241 aa	Known RBP	18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	DNAI1	Q9UI46	699 aa		18.2	■□□□□ 0.5
CLCN2-222	ENST00000638134	BECN2	A8MW95	431 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	GIGYF1	O75420	1035 aa	Predicted RBP	18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	LMAN1	P49257	510 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	SLC39A6	Q13433	755 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	CCDC91	Q7Z6B0	441 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	PACS2	Q86VP3	889 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	RASEF	Q8IZ41	740 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	SYTL4	Q96C24	671 aa	Predicted RBP	18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	SLC52A2	Q9HAB3	445 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	ARFGAP3	Q9NP61	516 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	GNAI2	P04899	355 aa		18.19	■□□□□ 0.5
CLCN2-222	ENST00000638134	PTF1A	Q7RTS3	328 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms