RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 USP17L4A6NCW7 530 aa18■□□□□ 0.47
CACNA1A-249ENST00000637777 SNAP23O00161 211 aa18■□□□□ 0.47
CACNA1A-249ENST00000637777 RPS12P25398 132 aaKnown RBP18■□□□□ 0.47
CACNA1A-249ENST00000637777 MAP1SQ66K74 1059 aaPredicted RBP18■□□□□ 0.47
CACNA1A-249ENST00000637777 USP17L1Q7RTZ2 530 aa18■□□□□ 0.47
CACNA1A-249ENST00000637777 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
CACNA1A-249ENST00000637777 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 RBM26Q5T8P6 1007 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 SIL1Q9H173 461 aa17.99■□□□□ 0.47
CACNA1A-249ENST00000637777 PSME4Q14997 1843 aa17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 DPF2Q92785 391 aa17.98■□□□□ 0.47
CACNA1A-249ENST00000637777 VIL1P09327 827 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-249ENST00000637777 HTRA3P83110 453 aa17.97■□□□□ 0.47
CACNA1A-249ENST00000637777 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-249ENST00000637777 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
CACNA1A-249ENST00000637777 GNAI2P04899 355 aa17.96■□□□□ 0.47
CACNA1A-249ENST00000637777 SAMD7Q7Z3H4 446 aa17.96■□□□□ 0.47
CACNA1A-249ENST00000637777 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
CACNA1A-249ENST00000637777 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
CACNA1A-249ENST00000637777 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 GTF2IP78347 998 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 AGBL3Q8NEM8 1001 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 CD209Q9NNX6 404 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
CACNA1A-249ENST00000637777 EYA2O00167 538 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 SRGAP3O43295 1099 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 OGFOD1Q8N543 542 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
CACNA1A-249ENST00000637777 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 MS4A1P11836 297 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 GYG1P46976 350 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 STRIP1Q5VSL9 837 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
CACNA1A-249ENST00000637777 PDE8BO95263 885 aa17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 HDAC9Q9UKV0 1011 aa17.92■□□□□ 0.46
CACNA1A-249ENST00000637777 CEP350Q5VT06 3117 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 SLC5A1P13866 664 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 DACT2Q5SW24 774 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 KIAA0825Q8IV33 1275 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 DCPSQ96C86 337 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 ZNF408Q9H9D4 720 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 CEP126Q9P2H0 1117 aa17.91■□□□□ 0.46
CACNA1A-249ENST00000637777 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 ITGBL1O95965 494 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 RLBP1P12271 317 aa17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 HIRAP54198 1017 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 ZC3H15Q8WU90 426 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 GLIS2Q9BZE0 524 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 MYOZ2Q9NPC6 264 aa17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 IQSEC3Q9UPP2 1182 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-249ENST00000637777 TRAF5O00463 557 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 CIAO1O76071 339 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 EGFRP00533 1210 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 CHAF1AQ13111 956 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 CREBZFQ9NS37 354 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 GGA3Q9NZ52 723 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 ABT1Q9ULW3 272 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
CACNA1A-249ENST00000637777 TRPM7Q96QT4 1865 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 IL1R1P14778 569 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 ATP2B3Q16720 1220 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 PAXIP1Q6ZW49 1069 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 CDC37L1Q7L3B6 337 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 VGLL2Q8N8G2 317 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 IRS2Q9Y4H2 1338 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 ZNF609O15014 1411 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 MYH13Q9UKX3 1938 aa17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 POLR2AP24928 1970 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-249ENST00000637777 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-249ENST00000637777 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms