RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-244ENST00000637625 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 NPR3P17342 541 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 TNS4Q8IZW8 715 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 COL26A1Q96A83 441 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 SAP130Q9H0E3 1048 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 PXDNQ92626 1479 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 GCP02774 474 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 P4HBP07237 508 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 EPHA4P54764 986 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 KCTD12Q96CX2 325 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-244ENST00000637625 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 USP19O94966 1318 aa16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 EXOSC9Q06265 439 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-244ENST00000637625 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
CACNA1A-244ENST00000637625 IGFBP4P22692 258 aa16.23■□□□□ 0.19
CACNA1A-244ENST00000637625 LHX8Q68G74 356 aa16.23■□□□□ 0.19
CACNA1A-244ENST00000637625 SCG3Q8WXD2 468 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-244ENST00000637625 MPSTP25325 297 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 IP6K1Q92551 441 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 OSBPL3Q9H4L5 887 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 IL16Q14005 1332 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 TSPAN10Q9H1Z9 355 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 KDRP35968 1356 aa16.22■□□□□ 0.19
CACNA1A-244ENST00000637625 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-244ENST00000637625 TSNAXIP1Q2TAA8 658 aa16.21■□□□□ 0.19
CACNA1A-244ENST00000637625 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
CACNA1A-244ENST00000637625 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-244ENST00000637625 MYCP01106 439 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 IL21Q9HBE4 155 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 COL19A1Q14993 1142 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 MCM10Q7L590 875 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 CDV3Q9UKY7 258 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-244ENST00000637625 BACH2Q9BYV9 841 aa16.19■□□□□ 0.18
CACNA1A-244ENST00000637625 PPEF1O14829 653 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 MRPL58Q14197 206 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 GDF10P55107 478 aa16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 SKOR1P84550 965 aa16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 NYAP1Q6ZVC0 841 aa16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 RBCK1Q9BYM8 510 aa16.18■□□□□ 0.18
CACNA1A-244ENST00000637625 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 NBPF6Q5VWK0 638 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 NBPF4Q96M43 638 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 TMPRSS4Q9NRS4 437 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 SPATA31A3Q5VYP0 1347 aa16.17■□□□□ 0.18
CACNA1A-244ENST00000637625 IGHA2P01877 340 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 GNAI1P63096 354 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 CCDC125Q86Z20 511 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 ETNK1Q9HBU6 452 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 IFT57Q9NWB7 429 aa16.16■□□□□ 0.18
CACNA1A-244ENST00000637625 PLA2G2CQ5R387 149 aa16.15■□□□□ 0.18
CACNA1A-244ENST00000637625 KRTAP3-3Q9BYR6 98 aa16.15■□□□□ 0.18
CACNA1A-244ENST00000637625 KRTAP3-2Q9BYR7 98 aa16.15■□□□□ 0.18
CACNA1A-244ENST00000637625 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
CACNA1A-244ENST00000637625 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
CACNA1A-244ENST00000637625 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.18
CACNA1A-244ENST00000637625 TREHO43280 583 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 TBCELQ5QJ74 424 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 VASH1Q7L8A9 365 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 FAM13AO94988 1023 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 CYLDQ9NQC7 956 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
CACNA1A-244ENST00000637625 ABCA3Q99758 1704 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 FMR1Q06787 632 aaKnown RBP eCLIP16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 FAM26DQ5JW98 314 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 CC2D2BQ6DHV5 1058 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 MAP4K5Q9Y4K4 846 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 COL18A1P39060 1754 aa16.13■□□□□ 0.17
CACNA1A-244ENST00000637625 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms