RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 GJB4Q9NTQ9 266 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 JCADQ9P266 1359 aa23.58■■□□□ 1.37
CACNA1A-243ENST00000637616 KIF13AQ9H1H9 1805 aa23.58■■□□□ 1.36
CACNA1A-243ENST00000637616 GCKRQ14397 625 aa23.58■■□□□ 1.36
CACNA1A-243ENST00000637616 COPS6Q7L5N1 327 aa23.58■■□□□ 1.36
CACNA1A-243ENST00000637616 PXDNQ92626 1479 aa23.57■■□□□ 1.36
CACNA1A-243ENST00000637616 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
CACNA1A-243ENST00000637616 UTYO14607 1347 aa23.57■■□□□ 1.36
CACNA1A-243ENST00000637616 NAA16Q6N069 864 aaPredicted RBP23.57■■□□□ 1.36
CACNA1A-243ENST00000637616 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
CACNA1A-243ENST00000637616 PPP1R13BQ96KQ4 1090 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 GOLIM4O00461 696 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 PTPN12Q05209 780 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 NEXNQ0ZGT2 675 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 UBE3BQ7Z3V4 1068 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 FMR1NBQ8N0W7 255 aaPredicted RBP23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 ZNF396Q96N95 335 aaPredicted RBP23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 NEUROD6Q96NK8 337 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 CLIC4Q9Y696 253 aa23.56■■□□□ 1.36
CACNA1A-243ENST00000637616 SF3A1Q15459 793 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 ZRSR1Q15695 479 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 MRPS27Q92552 414 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 NAT10Q9H0A0 1025 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 TBX22Q9Y458 520 aa23.54■■□□□ 1.36
CACNA1A-243ENST00000637616 LLPHQ9BRT6 129 aaKnown RBP23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 PHF8Q9UPP1 1060 aa23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 LMOD1P29536 600 aaPredicted RBP23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 GOLGA8FQ08AF8 430 aa23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 GOLGA8DPQ0D2H9 430 aa23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 HOMER1Q86YM7 354 aa23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 PDIA3P30101 505 aaKnown RBP23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
CACNA1A-243ENST00000637616 FDPSP14324 419 aaKnown RBP23.52■■□□□ 1.36
CACNA1A-243ENST00000637616 SFPQP23246 707 aaKnown RBP eCLIP23.52■■□□□ 1.36
CACNA1A-243ENST00000637616 GSDMDP57764 484 aa23.52■■□□□ 1.36
CACNA1A-243ENST00000637616 KIAA1468Q9P260 1216 aa23.52■■□□□ 1.36
CACNA1A-243ENST00000637616 E7EWF7 191 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 RFX5P48382 616 aaPredicted RBP23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 TIMM10P62072 90 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 PSME1Q06323 249 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 ATP1A3P13637 1013 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 STK38Q15208 465 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 ARHGAP29Q52LW3 1261 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 HAUS7Q99871 368 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 OSBPL5Q9H0X9 879 aaPredicted RBP23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 FAM53CQ9NYF3 392 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 CLCN6P51797 869 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 TRERF1Q96PN7 1200 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 COPRSQ9NQ92 184 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 DNAI1Q9UI46 699 aa23.51■■□□□ 1.35
CACNA1A-243ENST00000637616 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
CACNA1A-243ENST00000637616 EXOSC10Q01780 885 aaKnown RBP23.5■■□□□ 1.35
CACNA1A-243ENST00000637616 HAND2P61296 217 aa23.5■■□□□ 1.35
CACNA1A-243ENST00000637616 FAM177A1Q8N128 213 aaPredicted RBP23.5■■□□□ 1.35
CACNA1A-243ENST00000637616 EPC1Q9H2F5 836 aa23.5■■□□□ 1.35
CACNA1A-243ENST00000637616 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
CACNA1A-243ENST00000637616 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
CACNA1A-243ENST00000637616 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 ADALQ6DHV7 355 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 KBTBD3Q8NAB2 608 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 BBXQ8WY36 941 aaPredicted RBP23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 TMX1Q9H3N1 280 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 RGPD2P0DJD1 1756 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 HEG1Q9ULI3 1381 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 LINC00301Q8NCQ3 95 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 METTL22Q9BUU2 404 aaPredicted RBP23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 FHOD1Q9Y613 1164 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 L2HGDHQ9H9P8 463 aa23.48■■□□□ 1.35
CACNA1A-243ENST00000637616 HSPD1P10809 573 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 H2AFXP16104 143 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 SALL1Q9NSC2 1324 aa23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 SLC3A2P08195 630 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 HMGB1P09429 215 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 ANKRD24Q8TF21 1146 aa23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 NOL10Q9BSC4 688 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-243ENST00000637616 A0A087WZG4 1122 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 MARCKSP29966 332 aaPredicted RBP23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 HSP90AA4PQ58FG1 418 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 ZNF202O95125 648 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 CCDC93Q567U6 631 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 DPF2Q92785 391 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 RTEL1Q9NZ71 1219 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 IMPACTQ9P2X3 320 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 NEDD4P46934 1319 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 FANCGO15287 622 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 POLR3GO15318 223 aaPredicted RBP23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 NCAPHQ15003 741 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 TAF3Q5VWG9 929 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 LMBR1LQ6UX01 489 aa23.46■■□□□ 1.35
CACNA1A-243ENST00000637616 PAG1Q9NWQ8 432 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms