RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
CLN8-214ENST00000637594 DACT2Q5SW24 774 aa11.32□□□□□ -0.6
CLN8-214ENST00000637594 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
CLN8-214ENST00000637594 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
CLN8-214ENST00000637594 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 SLC34A2O95436 690 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 RASAL3Q86YV0 1011 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
CLN8-214ENST00000637594 GREM2Q9H772 168 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 IL16Q14005 1332 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 MYO3BQ8WXR4 1341 aa11.31□□□□□ -0.6
CLN8-214ENST00000637594 WNT10BO00744 389 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 TM4SF4P48230 202 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 CASP7P55210 303 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 GCKRQ14397 625 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 NOM1Q5C9Z4 860 aaKnown RBP11.3□□□□□ -0.6
CLN8-214ENST00000637594 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
CLN8-214ENST00000637594 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
CLN8-214ENST00000637594 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
CLN8-214ENST00000637594 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
CLN8-214ENST00000637594 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
CLN8-214ENST00000637594 C15orf52Q6ZUT6 534 aaKnown RBP11.29□□□□□ -0.6
CLN8-214ENST00000637594 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
CLN8-214ENST00000637594 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
CLN8-214ENST00000637594 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
CLN8-214ENST00000637594 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
CLN8-214ENST00000637594 G2E3Q7L622 706 aa11.28□□□□□ -0.6
CLN8-214ENST00000637594 CTU1Q7Z7A3 348 aaKnown RBP11.28□□□□□ -0.6
CLN8-214ENST00000637594 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
CLN8-214ENST00000637594 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
CLN8-214ENST00000637594 ZNF804BA4D1E1 1349 aa11.28□□□□□ -0.6
CLN8-214ENST00000637594 PSME4Q14997 1843 aa11.28□□□□□ -0.6
CLN8-214ENST00000637594 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 ITGA6P23229 1130 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 LINS1Q8NG48 757 aa11.27□□□□□ -0.61
CLN8-214ENST00000637594 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 UNCXA6NJT0 531 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 VAMP4O75379 141 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 NF2P35240 595 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 FLIIQ13045 1269 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 DNAAF4Q8WXU2 420 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 MPHOSPH8Q99549 860 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 MXD3Q9BW11 206 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 IRS2Q9Y4H2 1338 aa11.26□□□□□ -0.61
CLN8-214ENST00000637594 INHBEP58166 350 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 FKBP1AP62942 108 aaKnown RBP11.25□□□□□ -0.61
CLN8-214ENST00000637594 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 APOBEC3FQ8IUX4 373 aaKnown RBP11.25□□□□□ -0.61
CLN8-214ENST00000637594 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 HDAC9Q9UKV0 1011 aa11.25□□□□□ -0.61
CLN8-214ENST00000637594 IL1R1P14778 569 aa11.24□□□□□ -0.61
CLN8-214ENST00000637594 GTF2IP78347 998 aa11.24□□□□□ -0.61
CLN8-214ENST00000637594 FOXO4P98177 505 aa11.24□□□□□ -0.61
CLN8-214ENST00000637594 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
CLN8-214ENST00000637594 CHRNDQ07001 517 aa11.24□□□□□ -0.61
CLN8-214ENST00000637594 ZNF296Q8WUU4 475 aaPredicted RBP11.24□□□□□ -0.61
CLN8-214ENST00000637594 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
CLN8-214ENST00000637594 AKAP11Q9UKA4 1901 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 ANKRD18BA2A2Z9 1011 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 GPR25O00155 361 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 KLRK1P26718 216 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 FKBP5Q13451 457 aaPredicted RBP11.23□□□□□ -0.61
CLN8-214ENST00000637594 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
CLN8-214ENST00000637594 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
CLN8-214ENST00000637594 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
CLN8-214ENST00000637594 TTLL12Q14166 644 aaPredicted RBP11.22□□□□□ -0.61
CLN8-214ENST00000637594 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
CLN8-214ENST00000637594 SPRYD7Q5W111 196 aa11.22□□□□□ -0.61
CLN8-214ENST00000637594 CERS5Q8N5B7 392 aa11.22□□□□□ -0.61
CLN8-214ENST00000637594 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
CLN8-214ENST00000637594 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
CLN8-214ENST00000637594 COL1A1P02452 1464 aaPredicted RBP11.21□□□□□ -0.61
CLN8-214ENST00000637594 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.61
CLN8-214ENST00000637594 SASH1O94885 1247 aa11.21□□□□□ -0.61
CLN8-214ENST00000637594 KCNJ4P48050 445 aa11.21□□□□□ -0.61
CLN8-214ENST00000637594 SLC10A4Q96EP9 437 aa11.21□□□□□ -0.61
CLN8-214ENST00000637594 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
CLN8-214ENST00000637594 MYH3P11055 1940 aa11.21□□□□□ -0.62
CLN8-214ENST00000637594 MANSC4A6NHS7 340 aaPredicted RBP11.2□□□□□ -0.62
CLN8-214ENST00000637594 FKTNO75072 461 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms