RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 AKR1B10O60218 316 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 FMNL3Q8IVF7 1028 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 KRT19P08727 400 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 ZNF804AQ7Z570 1209 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 N4BP3O15049 544 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 MAN1A1P33908 653 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 METTL13Q8N6R0 699 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 ITKQ08881 620 aa18.35■□□□□ 0.53
CACNA1A-240ENST00000637432 RAPGEF1Q13905 1077 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 KIAA1524Q8TCG1 905 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 MED10Q9BTT4 135 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 MCM7P33993 719 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 ASIC1P78348 528 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 SF3A3Q12874 501 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 ESYT2A0FGR8 921 aa18.34■□□□□ 0.53
CACNA1A-240ENST00000637432 OATP04181 439 aa18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 TNNI2P48788 182 aa18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 ZBTB33Q86T24 672 aa18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 GBP7Q8N8V2 638 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 NSMCE1Q8WV22 266 aa18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.53
CACNA1A-240ENST00000637432 CCT6AP40227 531 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 IFT81Q8WYA0 676 aa18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 ITIH3Q06033 890 aa18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 BSPRYQ5W0U4 402 aa18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 CCDC110Q8TBZ0 833 aa18.33■□□□□ 0.52
CACNA1A-240ENST00000637432 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 DDX12PQ92771 950 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 TLDC2A0PJX2 215 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 RRP9O43818 475 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 TRPC3Q13507 836 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 SKIV2LQ15477 1246 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 ACBD5Q5T8D3 534 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 CEP120Q8N960 986 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 PSPC1Q8WXF1 523 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 LIMCH1Q9UPQ0 1083 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 SH2D4BQ5SQS7 431 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 STX10O60499 249 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 ATRIPQ8WXE1 791 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 SUDS3Q9H7L9 328 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-240ENST00000637432 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 WIZO95785 1651 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 INF2Q27J81 1249 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 DCLK2Q8N568 766 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 HSPA4P34932 840 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 TMEM57Q8N5G2 664 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 FRMD4BQ9Y2L6 1034 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-240ENST00000637432 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 ANKS4BQ8N8V4 417 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 NSRP1Q9H0G5 558 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 STK24Q9Y6E0 443 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 MX1P20591 662 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 MARCKSP29966 332 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 KIF3CO14782 793 aa18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 RTCBQ9Y3I0 505 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNA1A-240ENST00000637432 USH1GQ495M9 461 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 TCP10Q12799 353 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 LRRC27Q9C0I9 530 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 MNAT1P51948 309 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 PAGR1Q9BTK6 254 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 UBLCP1Q8WVY7 318 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 KIF22Q14807 665 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 GJB2P29033 226 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 RYBPQ8N488 228 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 USTQ9Y2C2 406 aa18.29■□□□□ 0.52
CACNA1A-240ENST00000637432 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms