RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 CTAGE6Q86UF2 777 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 CTAGE4Q8IX94 777 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 DBNDD2Q9BQY9 259 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 RRAGBQ5VZM2 374 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 OTUD7BQ6GQQ9 843 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 STX17P56962 302 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 RTN1Q16799 776 aa18.18■□□□□ 0.5
CLN5-218ENST00000637397 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 PTH1RQ03431 593 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 LRMPQ12912 555 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 ELF2Q15723 593 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 DHX58Q96C10 678 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 MYL5Q02045 173 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 SSH3Q8TE77 659 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
CLN5-218ENST00000637397 GOLGA1Q92805 767 aa18.16■□□□□ 0.5
CLN5-218ENST00000637397 PUF60Q9UHX1 559 aaKnown RBP18.16■□□□□ 0.5
CLN5-218ENST00000637397 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
CLN5-218ENST00000637397 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
CLN5-218ENST00000637397 IDEP14735 1019 aa18.16■□□□□ 0.5
CLN5-218ENST00000637397 TRIM47Q96LD4 638 aa18.16■□□□□ 0.5
CLN5-218ENST00000637397 CTAGE1Q96RT6 745 aa18.16■□□□□ 0.5
CLN5-218ENST00000637397 SEC63Q9UGP8 760 aaKnown RBP18.16■□□□□ 0.5
CLN5-218ENST00000637397 TRIM21P19474 475 aaKnown RBP18.15■□□□□ 0.5
CLN5-218ENST00000637397 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
CLN5-218ENST00000637397 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 TNNI3KQ59H18 835 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 FPGT-TNNI3KV9GXZ4 949 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 ERBB4Q15303 1308 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 RASEFQ8IZ41 740 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
CLN5-218ENST00000637397 EVCP57679 992 aa18.14■□□□□ 0.5
CLN5-218ENST00000637397 KRT23Q9C075 422 aa18.14■□□□□ 0.5
CLN5-218ENST00000637397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.5
CLN5-218ENST00000637397 PHACTR2O75167 634 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.49
CLN5-218ENST00000637397 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
CLN5-218ENST00000637397 SSH2Q76I76 1423 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 IBSPP21815 317 aaPredicted RBP18.14■□□□□ 0.49
CLN5-218ENST00000637397 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
CLN5-218ENST00000637397 NSFL1CQ9UNZ2 370 aaKnown RBP18.14■□□□□ 0.49
CLN5-218ENST00000637397 SBNO1A3KN83 1393 aa18.14■□□□□ 0.49
CLN5-218ENST00000637397 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 NR1I2O75469 434 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 CAPN2P17655 700 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 KIF20AO95235 890 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 SLC4A8Q2Y0W8 1093 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
CLN5-218ENST00000637397 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
CLN5-218ENST00000637397 BAG1Q99933 345 aaPredicted RBP18.13■□□□□ 0.49
CLN5-218ENST00000637397 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 TSG101Q99816 390 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 RGS12O14924 1447 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 AKR1B10O60218 316 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN5-218ENST00000637397 RSPH14Q9UHP6 348 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 SLC4A4Q9Y6R1 1079 aa18.13■□□□□ 0.49
CLN5-218ENST00000637397 HOXB7P09629 217 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 SPAG1Q07617 926 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 ZNF569Q5MCW4 686 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 CEP112Q8N8E3 955 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 IP6K1Q92551 441 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 ALS2CR12Q96Q35 445 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLN5-218ENST00000637397 OSBPL3Q9H4L5 887 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 RHOXF2BP0C7M4 288 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 FANCCQ00597 558 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 RHOXF2Q9BQY4 288 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 HELLSQ9NRZ9 838 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 CCDC178Q5BJE1 867 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 ANO1Q5XXA6 986 aa18.12■□□□□ 0.49
CLN5-218ENST00000637397 ELP1O95163 1332 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
CLN5-218ENST00000637397 RNF187Q5TA31 235 aaPredicted RBP18.11■□□□□ 0.49
CLN5-218ENST00000637397 DRC1Q96MC2 740 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 PYM1Q9BRP8 204 aaKnown RBP18.11■□□□□ 0.49
CLN5-218ENST00000637397 PYCARDQ9ULZ3 195 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 GCP02774 474 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 CARD6Q9BX69 1037 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 BCCIPQ9P287 314 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLN5-218ENST00000637397 CUL4AQ13619 759 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 ESR2Q92731 530 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 VPS18Q9P253 973 aa18.11■□□□□ 0.49
CLN5-218ENST00000637397 KIF5BP33176 963 aa18.1■□□□□ 0.49
CLN5-218ENST00000637397 KRI1Q8N9T8 703 aaKnown RBP18.1■□□□□ 0.49
CLN5-218ENST00000637397 EHBP1Q8NDI1 1231 aa18.1■□□□□ 0.49
CLN5-218ENST00000637397 ZNF287Q9HBT7 754 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms