RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	NXPE3	Q969Y0	559 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	SPACA7	Q96KW9	195 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	FAM161B	Q96MY7	647 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	HHIP	Q96QV1	700 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	BCO2	Q9BYV7	579 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	SRCIN1	Q9C0H9	1055 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	LIN7B	Q9HAP6	207 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	ABCB6	Q9NP58	842 aa		5.28	□□□□□ -1.56
ATRX-223	ENST00000637175	SORBS3	O60504	671 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	GADD45B	O75293	160 aa	Predicted RBP	5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	TRPA1	O75762	1119 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	RECK	O95980	971 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	GRIK5	Q16478	980 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	ZNF385C	Q66K41	422 aa	Predicted RBP	5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	KANK3	Q6NY19	840 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	CHSY3	Q70JA7	882 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	NPM2	Q86SE8	214 aa	Known RBP	5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	WHAMM	Q8TF30	809 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	PLD4	Q96BZ4	506 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	RBSN	Q9H1K0	784 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	EHD4	Q9H223	541 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	TRAK1	Q9UPV9	953 aa		5.27	□□□□□ -1.57
ATRX-223	ENST00000637175	PDE2A	O00408	941 aa	Predicted RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ALB	P02768	609 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	CTSH	P09668	335 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	HOXB4	P17483	251 aa	Predicted RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ALAS2	P22557	587 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	LOR	P23490	312 aa	Predicted RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	EIF4B	P23588	611 aa	Known RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ITPKA	P23677	461 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ITGAE	P38570	1179 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	PSAPL1	Q6NUJ1	521 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	NXPE4	Q6UWF7	544 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ADAMTSL4	Q6UY14	1074 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	GALNT6	Q8NCL4	622 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	C3orf58	Q8NDZ4	430 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ANKRD24	Q8TF21	1146 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	BTBD6	Q96KE9	485 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	POP1	Q99575	1024 aa	Known RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	ADAM19	Q9H013	955 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	SMG9	Q9H0W8	520 aa	Known RBP	5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	PRDM6	Q9NQX0	595 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	IGSF5	Q9NSI5	407 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	FAM8A1	Q9UBU6	413 aa		5.26	□□□□□ -1.57
ATRX-223	ENST00000637175	TMEM238L	A0A1B0GVL6	79 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	SMNDC1	O75940	238 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	USP17L7	P0C7H9	530 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	GRIA4	P48058	902 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	PTPN12	Q05209	780 aa	Known RBP	5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	ELMSAN1	Q6PJG2	1045 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	ILDR2	Q71H61	639 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	MICALL1	Q8N3F8	863 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	CRELD1	Q96HD1	420 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	BCL11A	Q9H165	835 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	MRS2	Q9HD23	443 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	SOX13	Q9UN79	622 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	TRIM33	Q9UPN9	1127 aa		5.25	□□□□□ -1.57
ATRX-223	ENST00000637175	METTL12	A8MUP2	240 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175		E9PSI1	815 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	RGS9	O75916	674 aa	Predicted RBP	5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	ARHGEF15	O94989	841 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	XRCC5	P13010	732 aa	Known RBP	5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	GSTT1	P30711	240 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	DGKG	P49619	791 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	COL9A3	Q14050	684 aa	Predicted RBP	5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	CEP135	Q66GS9	1140 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	CACTIN-AS1	Q8N1I8	211 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175	VTI1B	Q9UEU0	232 aa		5.24	□□□□□ -1.57
ATRX-223	ENST00000637175		A0A096LPE4	126 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175		A0A1W2PPZ6	126 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175		M0R082	166 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	PTPRA	P18433	802 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	BAG6	P46379	1132 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	ST13	P50502	369 aa	Known RBP	5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	AFF1	P51825	1210 aa	Known RBP	5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	SPRED3	Q2MJR0	410 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	ZNF417	Q8TAU3	575 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	NUDT8	Q8WV74	236 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	ZNF587	Q96SQ5	575 aa	Predicted RBP	5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	BACH2	Q9BYV9	841 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	ZNF576	Q9H609	170 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	PPM1H	Q9ULR3	514 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	USP31	Q70CQ4	1352 aa		5.23	□□□□□ -1.57
ATRX-223	ENST00000637175	LILRB5	O75023	590 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	NID1	P14543	1247 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	FCGRT	P55899	365 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	MAP3K10	Q02779	954 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	C8orf86	Q6ZUL3	223 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	VN1R5	Q7Z5H4	357 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	BSND	Q8WZ55	320 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	MUC3B	Q9H195	1237 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	JPH1	Q9HDC5	661 aa	Predicted RBP	5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	PPP4R2	Q9NY27	417 aa		5.22	□□□□□ -1.57
ATRX-223	ENST00000637175	EPHA1	P21709	976 aa		5.21	□□□□□ -1.58
ATRX-223	ENST00000637175	CDC27	P30260	824 aa		5.21	□□□□□ -1.58
ATRX-223	ENST00000637175	TSNAXIP1	Q2TAA8	658 aa		5.21	□□□□□ -1.58
ATRX-223	ENST00000637175	MEI1	Q5TIA1	1274 aa		5.21	□□□□□ -1.58
ATRX-223	ENST00000637175	DTHD1	Q6ZMT9	781 aa		5.21	□□□□□ -1.58
ATRX-223	ENST00000637175	SVOP	Q8N4V2	548 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms